Strain Fitness in Escherichia coli BL21 around ECD_00017
Experiment: Mixed culture, Halobacteriovorax-10
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Mixed culture, Halobacteriovorax-10 |
|---|---|---|---|---|---|
| remove | |||||
| 16,762 | + | -0.1 | |||
| 16,857 | - | ECD_00017 | 0.51 | -0.2 | |
| 16,857 | - | ECD_00017 | 0.51 | -0.7 | |
| 16,890 | - | ECD_00017 | 0.67 | +1.0 | |
| 16,890 | - | ECD_00017 | 0.67 | -0.4 | |
| 16,890 | - | ECD_00017 | 0.67 | -0.4 | |
| 16,922 | + | ECD_00017 | 0.82 | +0.4 | |
| 16,923 | - | ECD_00017 | 0.83 | -0.6 | |
| 16,932 | - | ECD_00017 | 0.87 | +0.1 | |
| 16,943 | + | +0.0 | |||
| 16,944 | - | +1.0 | |||
| 16,944 | - | -0.2 | |||
| 16,944 | - | -0.3 | |||
| 16,944 | - | +0.5 | |||
| 16,958 | + | +0.5 | |||
| 16,958 | + | -0.4 | |||
| 16,959 | - | +0.6 | |||
| 16,960 | + | -0.1 | |||
| 16,978 | + | +0.2 | |||
| 17,063 | - | -0.0 | |||
| 17,414 | - | -0.5 | |||
| 17,759 | + | ECD_00018 | 0.23 | +0.7 | |
| 17,836 | + | ECD_00018 | 0.30 | -0.7 |
Or see this region's nucleotide sequence