Strain Fitness in Escherichia coli BL21 around ECD_00011

Experiment: Mixed culture, Halobacteriovorax-10

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture, Halobacteriovorax-10
9,693	+		ECD_00009	0.66	+0.1
9,721	-		ECD_00009	0.71	+0.5
9,767	+		ECD_00009	0.79	-1.3
9,789	-		ECD_00009	0.82	-0.2
9,820	+		ECD_00009	0.88	-0.3
9,927	+				-0.2
9,978	-				+0.2
9,996	+		ECD_00010	0.12	+1.6
9,996	+		ECD_00010	0.12	+0.1
9,996	+		ECD_00010	0.12	-0.1
9,997	-		ECD_00010	0.13	+0.4
10,156	+		ECD_00010	0.41	+0.3
10,156	+		ECD_00010	0.41	-0.7
10,157	-		ECD_00010	0.41	-0.1
10,157	-		ECD_00010	0.41	+0.7
10,165	+		ECD_00010	0.42	+0.2
10,165	+		ECD_00010	0.42	+0.0
10,165	+		ECD_00010	0.42	+0.4
10,166	-		ECD_00010	0.42	+0.4
10,166	-		ECD_00010	0.42	+0.5
10,188	+		ECD_00010	0.46	-0.8
10,189	-		ECD_00010	0.46	+0.4
10,189	-		ECD_00010	0.46	+0.1
10,189	-		ECD_00010	0.46	-0.1
10,381	+		ECD_00010	0.80	+0.8
10,382	-		ECD_00010	0.80	+0.5
10,480	+				-0.1
10,481	-				-0.1
10,481	-				+0.1
10,481	-				+0.6
10,481	-				+0.2
10,548	+				-0.3
10,549	-				+0.3
10,634	+				+0.7
10,743	+		ECD_00011	0.14	+0.4
10,743	+		ECD_00011	0.14	+0.2
10,743	+		ECD_00011	0.14	+0.5
10,743	+		ECD_00011	0.14	-0.3
10,744	-		ECD_00011	0.14	-0.9
10,955	+				-0.5
10,956	-				+0.0
10,956	-				+0.0
10,956	-				+0.4
10,956	-				+1.0
11,127	-				-0.6
11,224	-				-0.7
11,304	-				-0.1
11,342	-				-0.2
11,369	-				-0.0
11,369	-				-0.1
11,431	-		ECD_00013	0.13	-0.2
11,532	+		ECD_00013	0.38	+0.3
11,533	-		ECD_00013	0.38	-1.3
11,587	+		ECD_00013	0.51	+1.0
11,593	+		ECD_00013	0.53	-0.5
11,620	+		ECD_00013	0.59	-0.0
11,620	+		ECD_00013	0.59	-1.0
11,707	-		ECD_00013	0.81	-0.2
11,707	-		ECD_00013	0.81	+0.0
11,707	-		ECD_00013	0.81	+1.2
11,880	+				-0.2
12,038	+				-0.1
12,038	+				-0.3
12,039	-				-0.1
12,039	-				+1.1
12,042	-				+0.3
12,109	+				-0.0
12,112	+				+0.0
12,112	+				+0.1
12,112	+				+0.1
12,143	+				-0.9
12,143	+				+0.6
12,143	+				-0.7
12,143	+				-0.2
12,145	+				-0.7
12,145	+				-2.0
12,145	+				-1.3
12,145	+				+0.1
12,145	+				-0.2