Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1145

Experiment: marine_broth_2216 with Chloride 500 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1143 and B158DRAFT_1144 are separated by 104 nucleotidesB158DRAFT_1144 and B158DRAFT_1145 are separated by 56 nucleotidesB158DRAFT_1145 and B158DRAFT_1146 are separated by 93 nucleotidesB158DRAFT_1146 and B158DRAFT_1147 are separated by 73 nucleotides B158DRAFT_1143: B158DRAFT_1143 - tol-pal system protein YbgF, at 1,180,866 to 1,181,600 _1143 B158DRAFT_1144: B158DRAFT_1144 - Organic radical activating enzymes, at 1,181,705 to 1,182,346 _1144 B158DRAFT_1145: B158DRAFT_1145 - hypothetical protein, at 1,182,403 to 1,182,510 _1145 B158DRAFT_1146: B158DRAFT_1146 - preQ(0) biosynthesis protein QueC, at 1,182,604 to 1,183,278 _1146 B158DRAFT_1147: B158DRAFT_1147 - hypothetical protein, at 1,183,352 to 1,183,792 _1147 Position (kb) 1182 1183Strain fitness (log2 ratio) -2 -1 0 1at 1181.490 kb on - strand, within B158DRAFT_1143at 1181.623 kb on - strandat 1181.697 kb on - strandat 1181.697 kb on - strandat 1181.697 kb on - strandat 1181.709 kb on - strandat 1181.711 kb on - strandat 1181.746 kb on + strandat 1181.755 kb on - strandat 1181.756 kb on - strandat 1181.756 kb on - strandat 1181.777 kb on + strand, within B158DRAFT_1144at 1181.777 kb on + strand, within B158DRAFT_1144at 1181.785 kb on - strand, within B158DRAFT_1144at 1181.802 kb on - strand, within B158DRAFT_1144at 1181.809 kb on - strand, within B158DRAFT_1144at 1181.895 kb on + strand, within B158DRAFT_1144at 1181.970 kb on + strand, within B158DRAFT_1144at 1181.972 kb on + strand, within B158DRAFT_1144at 1181.978 kb on - strand, within B158DRAFT_1144at 1182.030 kb on + strand, within B158DRAFT_1144at 1182.102 kb on + strand, within B158DRAFT_1144at 1182.112 kb on + strand, within B158DRAFT_1144at 1182.231 kb on + strand, within B158DRAFT_1144at 1182.231 kb on + strand, within B158DRAFT_1144at 1182.231 kb on + strand, within B158DRAFT_1144at 1182.231 kb on + strand, within B158DRAFT_1144at 1182.231 kb on + strand, within B158DRAFT_1144at 1182.239 kb on - strand, within B158DRAFT_1144at 1182.239 kb on - strand, within B158DRAFT_1144at 1182.239 kb on - strand, within B158DRAFT_1144at 1182.239 kb on - strand, within B158DRAFT_1144at 1182.239 kb on - strand, within B158DRAFT_1144at 1182.239 kb on - strand, within B158DRAFT_1144at 1182.241 kb on + strand, within B158DRAFT_1144at 1182.249 kb on + strand, within B158DRAFT_1144at 1182.345 kb on + strandat 1182.372 kb on - strandat 1182.467 kb on + strand, within B158DRAFT_1145at 1182.469 kb on + strand, within B158DRAFT_1145at 1182.475 kb on - strand, within B158DRAFT_1145at 1182.477 kb on + strand, within B158DRAFT_1145at 1182.477 kb on + strand, within B158DRAFT_1145at 1182.477 kb on + strand, within B158DRAFT_1145at 1182.477 kb on + strand, within B158DRAFT_1145at 1182.477 kb on + strand, within B158DRAFT_1145at 1182.477 kb on + strand, within B158DRAFT_1145at 1182.477 kb on + strand, within B158DRAFT_1145at 1182.477 kb on + strand, within B158DRAFT_1145at 1182.477 kb on + strand, within B158DRAFT_1145at 1182.477 kb on + strand, within B158DRAFT_1145at 1182.477 kb on + strand, within B158DRAFT_1145at 1182.477 kb on + strand, within B158DRAFT_1145at 1182.477 kb on - strand, within B158DRAFT_1145at 1182.485 kb on - strand, within B158DRAFT_1145at 1182.485 kb on - strand, within B158DRAFT_1145at 1182.485 kb on - strand, within B158DRAFT_1145at 1182.485 kb on - strand, within B158DRAFT_1145at 1182.485 kb on - strand, within B158DRAFT_1145at 1182.485 kb on - strand, within B158DRAFT_1145at 1182.485 kb on - strand, within B158DRAFT_1145at 1182.485 kb on - strand, within B158DRAFT_1145at 1182.485 kb on - strand, within B158DRAFT_1145at 1182.530 kb on + strandat 1182.530 kb on + strandat 1182.530 kb on + strandat 1182.530 kb on + strandat 1182.556 kb on + strandat 1182.556 kb on + strandat 1182.563 kb on + strandat 1182.564 kb on - strandat 1182.571 kb on - strandat 1182.622 kb on + strandat 1182.637 kb on + strandat 1182.647 kb on + strandat 1182.687 kb on - strand, within B158DRAFT_1146at 1182.695 kb on - strand, within B158DRAFT_1146at 1182.695 kb on - strand, within B158DRAFT_1146at 1182.722 kb on + strand, within B158DRAFT_1146at 1182.732 kb on + strand, within B158DRAFT_1146at 1182.732 kb on + strand, within B158DRAFT_1146at 1182.740 kb on - strand, within B158DRAFT_1146at 1182.815 kb on - strand, within B158DRAFT_1146at 1182.836 kb on + strand, within B158DRAFT_1146at 1182.844 kb on - strand, within B158DRAFT_1146at 1182.919 kb on + strand, within B158DRAFT_1146at 1182.924 kb on + strand, within B158DRAFT_1146at 1182.924 kb on + strand, within B158DRAFT_1146at 1182.924 kb on + strand, within B158DRAFT_1146at 1182.924 kb on + strand, within B158DRAFT_1146at 1182.924 kb on + strand, within B158DRAFT_1146at 1182.924 kb on + strand, within B158DRAFT_1146at 1182.932 kb on - strand, within B158DRAFT_1146at 1182.937 kb on + strand, within B158DRAFT_1146at 1182.939 kb on + strand, within B158DRAFT_1146at 1182.947 kb on - strand, within B158DRAFT_1146at 1182.995 kb on - strand, within B158DRAFT_1146at 1183.000 kb on - strand, within B158DRAFT_1146at 1183.130 kb on + strand, within B158DRAFT_1146at 1183.130 kb on + strand, within B158DRAFT_1146at 1183.130 kb on + strand, within B158DRAFT_1146at 1183.130 kb on + strand, within B158DRAFT_1146at 1183.130 kb on + strand, within B158DRAFT_1146at 1183.130 kb on + strand, within B158DRAFT_1146at 1183.138 kb on - strand, within B158DRAFT_1146at 1183.138 kb on - strand, within B158DRAFT_1146at 1183.138 kb on - strand, within B158DRAFT_1146at 1183.138 kb on - strand, within B158DRAFT_1146at 1183.150 kb on - strand, within B158DRAFT_1146at 1183.176 kb on + strand, within B158DRAFT_1146at 1183.184 kb on - strand, within B158DRAFT_1146at 1183.194 kb on + strand, within B158DRAFT_1146at 1183.202 kb on - strand, within B158DRAFT_1146at 1183.202 kb on - strand, within B158DRAFT_1146at 1183.202 kb on - strand, within B158DRAFT_1146at 1183.204 kb on - strand, within B158DRAFT_1146at 1183.235 kb on + strandat 1183.235 kb on + strandat 1183.248 kb on + strandat 1183.256 kb on - strandat 1183.302 kb on + strandat 1183.331 kb on - strandat 1183.333 kb on - strandat 1183.335 kb on + strandat 1183.335 kb on + strandat 1183.335 kb on + strandat 1183.335 kb on + strandat 1183.335 kb on + strandat 1183.335 kb on + strandat 1183.335 kb on + strandat 1183.342 kb on + strandat 1183.343 kb on - strandat 1183.343 kb on - strandat 1183.350 kb on - strandat 1183.431 kb on + strand, within B158DRAFT_1147at 1183.431 kb on + strand, within B158DRAFT_1147at 1183.431 kb on + strand, within B158DRAFT_1147at 1183.431 kb on + strand, within B158DRAFT_1147at 1183.431 kb on - strand, within B158DRAFT_1147at 1183.433 kb on + strand, within B158DRAFT_1147at 1183.433 kb on + strand, within B158DRAFT_1147at 1183.439 kb on - strand, within B158DRAFT_1147at 1183.439 kb on - strand, within B158DRAFT_1147at 1183.439 kb on - strand, within B158DRAFT_1147at 1183.441 kb on - strand, within B158DRAFT_1147at 1183.441 kb on - strand, within B158DRAFT_1147at 1183.441 kb on - strand, within B158DRAFT_1147at 1183.442 kb on + strand, within B158DRAFT_1147at 1183.442 kb on + strand, within B158DRAFT_1147at 1183.442 kb on + strand, within B158DRAFT_1147at 1183.464 kb on + strand, within B158DRAFT_1147at 1183.464 kb on + strand, within B158DRAFT_1147at 1183.464 kb on + strand, within B158DRAFT_1147at 1183.472 kb on - strand, within B158DRAFT_1147at 1183.472 kb on - strand, within B158DRAFT_1147at 1183.472 kb on - strand, within B158DRAFT_1147at 1183.472 kb on - strand, within B158DRAFT_1147at 1183.472 kb on - strand, within B158DRAFT_1147at 1183.472 kb on - strand, within B158DRAFT_1147at 1183.485 kb on + strand, within B158DRAFT_1147

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Per-strain Table

Position Strand Gene LocusTag Fraction marine_broth_2216 with Chloride 500 mM
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1,181,490 - B158DRAFT_1143 0.85 +1.3
1,181,623 - -0.1
1,181,697 - +1.0
1,181,697 - +0.1
1,181,697 - -0.9
1,181,709 - -0.1
1,181,711 - +0.2
1,181,746 + +0.5
1,181,755 - +0.4
1,181,756 - +0.8
1,181,756 - -0.4
1,181,777 + B158DRAFT_1144 0.11 -0.0
1,181,777 + B158DRAFT_1144 0.11 -0.2
1,181,785 - B158DRAFT_1144 0.12 -0.4
1,181,802 - B158DRAFT_1144 0.15 -0.6
1,181,809 - B158DRAFT_1144 0.16 -0.2
1,181,895 + B158DRAFT_1144 0.30 -0.2
1,181,970 + B158DRAFT_1144 0.41 -0.2
1,181,972 + B158DRAFT_1144 0.42 +0.1
1,181,978 - B158DRAFT_1144 0.43 +0.5
1,182,030 + B158DRAFT_1144 0.51 -0.7
1,182,102 + B158DRAFT_1144 0.62 -0.1
1,182,112 + B158DRAFT_1144 0.63 -0.3
1,182,231 + B158DRAFT_1144 0.82 +0.5
1,182,231 + B158DRAFT_1144 0.82 -0.7
1,182,231 + B158DRAFT_1144 0.82 -0.1
1,182,231 + B158DRAFT_1144 0.82 -0.1
1,182,231 + B158DRAFT_1144 0.82 -0.0
1,182,239 - B158DRAFT_1144 0.83 -0.2
1,182,239 - B158DRAFT_1144 0.83 -1.2
1,182,239 - B158DRAFT_1144 0.83 -0.4
1,182,239 - B158DRAFT_1144 0.83 -2.6
1,182,239 - B158DRAFT_1144 0.83 +0.1
1,182,239 - B158DRAFT_1144 0.83 -1.0
1,182,241 + B158DRAFT_1144 0.83 -0.0
1,182,249 + B158DRAFT_1144 0.85 -0.4
1,182,345 + -0.1
1,182,372 - -0.1
1,182,467 + B158DRAFT_1145 0.59 -2.1
1,182,469 + B158DRAFT_1145 0.61 -0.4
1,182,475 - B158DRAFT_1145 0.67 +0.4
1,182,477 + B158DRAFT_1145 0.69 -0.4
1,182,477 + B158DRAFT_1145 0.69 +0.7
1,182,477 + B158DRAFT_1145 0.69 +0.4
1,182,477 + B158DRAFT_1145 0.69 -0.8
1,182,477 + B158DRAFT_1145 0.69 -0.1
1,182,477 + B158DRAFT_1145 0.69 -0.6
1,182,477 + B158DRAFT_1145 0.69 +0.2
1,182,477 + B158DRAFT_1145 0.69 -0.2
1,182,477 + B158DRAFT_1145 0.69 -0.1
1,182,477 + B158DRAFT_1145 0.69 -1.2
1,182,477 + B158DRAFT_1145 0.69 +0.7
1,182,477 + B158DRAFT_1145 0.69 -1.7
1,182,477 - B158DRAFT_1145 0.69 +0.0
1,182,485 - B158DRAFT_1145 0.76 -1.2
1,182,485 - B158DRAFT_1145 0.76 -0.3
1,182,485 - B158DRAFT_1145 0.76 +0.8
1,182,485 - B158DRAFT_1145 0.76 +0.5
1,182,485 - B158DRAFT_1145 0.76 -0.3
1,182,485 - B158DRAFT_1145 0.76 -0.2
1,182,485 - B158DRAFT_1145 0.76 -0.3
1,182,485 - B158DRAFT_1145 0.76 +0.1
1,182,485 - B158DRAFT_1145 0.76 -0.1
1,182,530 + -0.4
1,182,530 + +0.2
1,182,530 + -1.0
1,182,530 + -1.3
1,182,556 + -0.1
1,182,556 + -0.8
1,182,563 + +0.2
1,182,564 - +0.1
1,182,571 - +0.2
1,182,622 + -0.9
1,182,637 + +0.4
1,182,647 + -0.2
1,182,687 - B158DRAFT_1146 0.12 -0.1
1,182,695 - B158DRAFT_1146 0.13 -2.1
1,182,695 - B158DRAFT_1146 0.13 -0.5
1,182,722 + B158DRAFT_1146 0.17 -0.2
1,182,732 + B158DRAFT_1146 0.19 -0.2
1,182,732 + B158DRAFT_1146 0.19 +0.1
1,182,740 - B158DRAFT_1146 0.20 +0.0
1,182,815 - B158DRAFT_1146 0.31 -0.2
1,182,836 + B158DRAFT_1146 0.34 -0.3
1,182,844 - B158DRAFT_1146 0.36 -0.5
1,182,919 + B158DRAFT_1146 0.47 +0.6
1,182,924 + B158DRAFT_1146 0.47 -0.3
1,182,924 + B158DRAFT_1146 0.47 -0.1
1,182,924 + B158DRAFT_1146 0.47 -0.2
1,182,924 + B158DRAFT_1146 0.47 -0.0
1,182,924 + B158DRAFT_1146 0.47 -1.0
1,182,924 + B158DRAFT_1146 0.47 -0.7
1,182,932 - B158DRAFT_1146 0.49 +0.4
1,182,937 + B158DRAFT_1146 0.49 -1.3
1,182,939 + B158DRAFT_1146 0.50 -1.7
1,182,947 - B158DRAFT_1146 0.51 +0.5
1,182,995 - B158DRAFT_1146 0.58 -0.2
1,183,000 - B158DRAFT_1146 0.59 -0.2
1,183,130 + B158DRAFT_1146 0.78 -0.2
1,183,130 + B158DRAFT_1146 0.78 -0.1
1,183,130 + B158DRAFT_1146 0.78 -0.7
1,183,130 + B158DRAFT_1146 0.78 +0.6
1,183,130 + B158DRAFT_1146 0.78 -0.6
1,183,130 + B158DRAFT_1146 0.78 -0.0
1,183,138 - B158DRAFT_1146 0.79 -0.1
1,183,138 - B158DRAFT_1146 0.79 +0.0
1,183,138 - B158DRAFT_1146 0.79 -0.3
1,183,138 - B158DRAFT_1146 0.79 +0.6
1,183,150 - B158DRAFT_1146 0.81 -0.9
1,183,176 + B158DRAFT_1146 0.85 -0.5
1,183,184 - B158DRAFT_1146 0.86 -1.2
1,183,194 + B158DRAFT_1146 0.87 -0.8
1,183,202 - B158DRAFT_1146 0.89 -2.4
1,183,202 - B158DRAFT_1146 0.89 +0.0
1,183,202 - B158DRAFT_1146 0.89 -0.5
1,183,204 - B158DRAFT_1146 0.89 +1.0
1,183,235 + +0.9
1,183,235 + +0.2
1,183,248 + +0.6
1,183,256 - -0.2
1,183,302 + -0.2
1,183,331 - +0.5
1,183,333 - -0.4
1,183,335 + +0.4
1,183,335 + +0.3
1,183,335 + +0.1
1,183,335 + +0.3
1,183,335 + +0.3
1,183,335 + -0.4
1,183,335 + -0.8
1,183,342 + -2.5
1,183,343 - -0.7
1,183,343 - -0.4
1,183,350 - +0.1
1,183,431 + B158DRAFT_1147 0.18 -0.5
1,183,431 + B158DRAFT_1147 0.18 -2.4
1,183,431 + B158DRAFT_1147 0.18 +0.8
1,183,431 + B158DRAFT_1147 0.18 -0.4
1,183,431 - B158DRAFT_1147 0.18 -0.4
1,183,433 + B158DRAFT_1147 0.18 +1.0
1,183,433 + B158DRAFT_1147 0.18 -0.2
1,183,439 - B158DRAFT_1147 0.20 +0.2
1,183,439 - B158DRAFT_1147 0.20 -1.9
1,183,439 - B158DRAFT_1147 0.20 +0.1
1,183,441 - B158DRAFT_1147 0.20 -0.4
1,183,441 - B158DRAFT_1147 0.20 +0.4
1,183,441 - B158DRAFT_1147 0.20 -1.0
1,183,442 + B158DRAFT_1147 0.20 +0.1
1,183,442 + B158DRAFT_1147 0.20 -0.3
1,183,442 + B158DRAFT_1147 0.20 -0.4
1,183,464 + B158DRAFT_1147 0.25 +0.1
1,183,464 + B158DRAFT_1147 0.25 -0.5
1,183,464 + B158DRAFT_1147 0.25 -1.5
1,183,472 - B158DRAFT_1147 0.27 +0.0
1,183,472 - B158DRAFT_1147 0.27 +0.1
1,183,472 - B158DRAFT_1147 0.27 +0.2
1,183,472 - B158DRAFT_1147 0.27 -0.2
1,183,472 - B158DRAFT_1147 0.27 +0.1
1,183,472 - B158DRAFT_1147 0.27 +0.6
1,183,485 + B158DRAFT_1147 0.30 +0.1

Or see this region's nucleotide sequence