Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0934

Experiment: marine_broth_2216 with Chloride 500 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0933 and B158DRAFT_0934 are separated by 1 nucleotidesB158DRAFT_0934 and B158DRAFT_0935 overlap by 7 nucleotides B158DRAFT_0933: B158DRAFT_0933 - Na+/proline symporter, at 961,123 to 962,544 _0933 B158DRAFT_0934: B158DRAFT_0934 - hypothetical protein, at 962,546 to 962,668 _0934 B158DRAFT_0935: B158DRAFT_0935 - Aspartate carbamoyltransferase, catalytic chain, at 962,662 to 963,732 _0935 Position (kb) 962 963Strain fitness (log2 ratio) -2 -1 0 1 2at 961.551 kb on + strand, within B158DRAFT_0933at 961.551 kb on + strand, within B158DRAFT_0933at 961.553 kb on - strand, within B158DRAFT_0933at 961.566 kb on + strand, within B158DRAFT_0933at 961.589 kb on + strand, within B158DRAFT_0933at 961.597 kb on - strand, within B158DRAFT_0933at 961.597 kb on - strand, within B158DRAFT_0933at 961.599 kb on + strand, within B158DRAFT_0933at 961.629 kb on + strand, within B158DRAFT_0933at 961.631 kb on + strand, within B158DRAFT_0933at 961.631 kb on + strand, within B158DRAFT_0933at 961.631 kb on + strand, within B158DRAFT_0933at 961.637 kb on - strand, within B158DRAFT_0933at 961.637 kb on - strand, within B158DRAFT_0933at 961.639 kb on - strand, within B158DRAFT_0933at 961.660 kb on + strand, within B158DRAFT_0933at 961.705 kb on + strand, within B158DRAFT_0933at 961.785 kb on - strand, within B158DRAFT_0933at 961.785 kb on - strand, within B158DRAFT_0933at 962.017 kb on + strand, within B158DRAFT_0933at 962.025 kb on - strand, within B158DRAFT_0933at 962.066 kb on - strand, within B158DRAFT_0933at 962.140 kb on - strand, within B158DRAFT_0933at 962.172 kb on - strand, within B158DRAFT_0933at 962.207 kb on - strand, within B158DRAFT_0933at 962.258 kb on - strand, within B158DRAFT_0933at 962.259 kb on + strand, within B158DRAFT_0933at 962.259 kb on + strand, within B158DRAFT_0933at 962.275 kb on - strand, within B158DRAFT_0933at 962.382 kb on - strand, within B158DRAFT_0933at 962.465 kb on + strandat 962.473 kb on - strandat 962.594 kb on + strand, within B158DRAFT_0934at 962.602 kb on - strand, within B158DRAFT_0934at 962.604 kb on + strand, within B158DRAFT_0934at 962.627 kb on + strand, within B158DRAFT_0934at 962.646 kb on + strand, within B158DRAFT_0934at 962.654 kb on - strand, within B158DRAFT_0934at 962.733 kb on + strandat 962.733 kb on + strandat 962.733 kb on + strandat 962.733 kb on + strandat 962.891 kb on - strand, within B158DRAFT_0935at 962.921 kb on - strand, within B158DRAFT_0935at 962.973 kb on - strand, within B158DRAFT_0935at 963.080 kb on + strand, within B158DRAFT_0935at 963.080 kb on + strand, within B158DRAFT_0935at 963.080 kb on + strand, within B158DRAFT_0935at 963.080 kb on + strand, within B158DRAFT_0935at 963.080 kb on + strand, within B158DRAFT_0935at 963.080 kb on + strand, within B158DRAFT_0935at 963.080 kb on + strand, within B158DRAFT_0935at 963.080 kb on + strand, within B158DRAFT_0935at 963.080 kb on + strand, within B158DRAFT_0935at 963.088 kb on - strand, within B158DRAFT_0935at 963.088 kb on - strand, within B158DRAFT_0935at 963.088 kb on - strand, within B158DRAFT_0935at 963.088 kb on - strand, within B158DRAFT_0935at 963.088 kb on - strand, within B158DRAFT_0935at 963.088 kb on - strand, within B158DRAFT_0935at 963.088 kb on - strand, within B158DRAFT_0935at 963.088 kb on - strand, within B158DRAFT_0935at 963.088 kb on - strand, within B158DRAFT_0935at 963.088 kb on - strand, within B158DRAFT_0935at 963.186 kb on + strand, within B158DRAFT_0935at 963.285 kb on + strand, within B158DRAFT_0935at 963.285 kb on + strand, within B158DRAFT_0935at 963.295 kb on + strand, within B158DRAFT_0935at 963.303 kb on - strand, within B158DRAFT_0935at 963.596 kb on + strand, within B158DRAFT_0935at 963.596 kb on + strand, within B158DRAFT_0935at 963.604 kb on - strand, within B158DRAFT_0935at 963.604 kb on - strand, within B158DRAFT_0935

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Per-strain Table

Position Strand Gene LocusTag Fraction marine_broth_2216 with Chloride 500 mM
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961,551 + B158DRAFT_0933 0.30 +0.3
961,551 + B158DRAFT_0933 0.30 -0.4
961,553 - B158DRAFT_0933 0.30 -0.3
961,566 + B158DRAFT_0933 0.31 -0.5
961,589 + B158DRAFT_0933 0.33 +0.2
961,597 - B158DRAFT_0933 0.33 -0.5
961,597 - B158DRAFT_0933 0.33 +0.3
961,599 + B158DRAFT_0933 0.33 -0.1
961,629 + B158DRAFT_0933 0.36 -0.6
961,631 + B158DRAFT_0933 0.36 +0.0
961,631 + B158DRAFT_0933 0.36 -0.6
961,631 + B158DRAFT_0933 0.36 +0.4
961,637 - B158DRAFT_0933 0.36 -0.7
961,637 - B158DRAFT_0933 0.36 -0.6
961,639 - B158DRAFT_0933 0.36 +0.4
961,660 + B158DRAFT_0933 0.38 -0.3
961,705 + B158DRAFT_0933 0.41 -0.4
961,785 - B158DRAFT_0933 0.47 -0.2
961,785 - B158DRAFT_0933 0.47 -0.3
962,017 + B158DRAFT_0933 0.63 -0.2
962,025 - B158DRAFT_0933 0.63 -0.5
962,066 - B158DRAFT_0933 0.66 -0.4
962,140 - B158DRAFT_0933 0.72 +0.2
962,172 - B158DRAFT_0933 0.74 -0.5
962,207 - B158DRAFT_0933 0.76 -0.0
962,258 - B158DRAFT_0933 0.80 -0.3
962,259 + B158DRAFT_0933 0.80 +0.3
962,259 + B158DRAFT_0933 0.80 -1.7
962,275 - B158DRAFT_0933 0.81 +0.2
962,382 - B158DRAFT_0933 0.89 -0.3
962,465 + -1.6
962,473 - -0.0
962,594 + B158DRAFT_0934 0.39 +0.2
962,602 - B158DRAFT_0934 0.46 +0.3
962,604 + B158DRAFT_0934 0.47 -1.1
962,627 + B158DRAFT_0934 0.66 -0.0
962,646 + B158DRAFT_0934 0.81 +0.7
962,654 - B158DRAFT_0934 0.88 +1.6
962,733 + -0.1
962,733 + -0.1
962,733 + -1.1
962,733 + -0.9
962,891 - B158DRAFT_0935 0.21 +0.0
962,921 - B158DRAFT_0935 0.24 -0.6
962,973 - B158DRAFT_0935 0.29 -0.2
963,080 + B158DRAFT_0935 0.39 -0.2
963,080 + B158DRAFT_0935 0.39 -1.2
963,080 + B158DRAFT_0935 0.39 +0.3
963,080 + B158DRAFT_0935 0.39 -0.6
963,080 + B158DRAFT_0935 0.39 +0.3
963,080 + B158DRAFT_0935 0.39 -0.2
963,080 + B158DRAFT_0935 0.39 -0.2
963,080 + B158DRAFT_0935 0.39 +0.4
963,080 + B158DRAFT_0935 0.39 +1.8
963,088 - B158DRAFT_0935 0.40 -0.2
963,088 - B158DRAFT_0935 0.40 -1.1
963,088 - B158DRAFT_0935 0.40 -1.1
963,088 - B158DRAFT_0935 0.40 -0.0
963,088 - B158DRAFT_0935 0.40 +1.7
963,088 - B158DRAFT_0935 0.40 +0.2
963,088 - B158DRAFT_0935 0.40 +0.2
963,088 - B158DRAFT_0935 0.40 +0.1
963,088 - B158DRAFT_0935 0.40 -0.4
963,088 - B158DRAFT_0935 0.40 -2.7
963,186 + B158DRAFT_0935 0.49 +0.3
963,285 + B158DRAFT_0935 0.58 +0.1
963,285 + B158DRAFT_0935 0.58 -0.6
963,295 + B158DRAFT_0935 0.59 -1.8
963,303 - B158DRAFT_0935 0.60 -0.2
963,596 + B158DRAFT_0935 0.87 -0.9
963,596 + B158DRAFT_0935 0.87 -1.0
963,604 - B158DRAFT_0935 0.88 +0.0
963,604 - B158DRAFT_0935 0.88 -0.0

Or see this region's nucleotide sequence