Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0868

Experiment: marine_broth_2216 with Chloride 500 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0866 and B158DRAFT_0867 overlap by 8 nucleotidesB158DRAFT_0867 and B158DRAFT_0868 are separated by 20 nucleotidesB158DRAFT_0868 and B158DRAFT_0869 are separated by 111 nucleotidesB158DRAFT_0869 and B158DRAFT_0870 overlap by 27 nucleotides B158DRAFT_0866: B158DRAFT_0866 - putative pimeloyl-BioC--CoA transferase BioH, at 884,242 to 885,018 _0866 B158DRAFT_0867: B158DRAFT_0867 - biotin biosynthesis protein BioC, at 885,011 to 885,868 _0867 B158DRAFT_0868: B158DRAFT_0868 - hypothetical protein, at 885,889 to 886,593 _0868 B158DRAFT_0869: B158DRAFT_0869 - dethiobiotin synthase, at 886,705 to 887,400 _0869 B158DRAFT_0870: B158DRAFT_0870 - hypothetical protein, at 887,374 to 887,784 _0870 Position (kb) 885 886 887Strain fitness (log2 ratio) -2 -1 0 1at 885.815 kb on + strandat 885.825 kb on + strandat 885.833 kb on - strandat 885.833 kb on - strandat 885.880 kb on + strandat 886.072 kb on + strand, within B158DRAFT_0868at 886.072 kb on + strand, within B158DRAFT_0868at 886.107 kb on + strand, within B158DRAFT_0868at 886.224 kb on + strand, within B158DRAFT_0868at 886.254 kb on - strand, within B158DRAFT_0868at 886.307 kb on + strand, within B158DRAFT_0868at 886.341 kb on + strand, within B158DRAFT_0868at 886.341 kb on + strand, within B158DRAFT_0868at 886.346 kb on + strand, within B158DRAFT_0868at 886.351 kb on - strand, within B158DRAFT_0868at 886.404 kb on - strand, within B158DRAFT_0868at 886.470 kb on - strand, within B158DRAFT_0868at 886.507 kb on + strand, within B158DRAFT_0868at 886.507 kb on + strand, within B158DRAFT_0868at 886.507 kb on + strand, within B158DRAFT_0868at 886.512 kb on + strand, within B158DRAFT_0868at 886.512 kb on + strand, within B158DRAFT_0868at 886.512 kb on + strand, within B158DRAFT_0868at 886.515 kb on - strand, within B158DRAFT_0868at 886.515 kb on - strand, within B158DRAFT_0868at 886.515 kb on - strand, within B158DRAFT_0868at 886.515 kb on - strand, within B158DRAFT_0868at 886.567 kb on + strandat 886.575 kb on - strandat 887.359 kb on + strandat 887.381 kb on + strandat 887.381 kb on + strandat 887.397 kb on - strandat 887.436 kb on + strand, within B158DRAFT_0870at 887.436 kb on + strand, within B158DRAFT_0870at 887.530 kb on + strand, within B158DRAFT_0870at 887.534 kb on - strand, within B158DRAFT_0870at 887.555 kb on - strand, within B158DRAFT_0870at 887.559 kb on + strand, within B158DRAFT_0870at 887.559 kb on + strand, within B158DRAFT_0870at 887.566 kb on + strand, within B158DRAFT_0870at 887.566 kb on + strand, within B158DRAFT_0870at 887.567 kb on - strand, within B158DRAFT_0870at 887.574 kb on - strand, within B158DRAFT_0870

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Per-strain Table

Position Strand Gene LocusTag Fraction marine_broth_2216 with Chloride 500 mM
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885,815 + -1.6
885,825 + +0.1
885,833 - +1.0
885,833 - -1.2
885,880 + +0.1
886,072 + B158DRAFT_0868 0.26 +0.1
886,072 + B158DRAFT_0868 0.26 -0.2
886,107 + B158DRAFT_0868 0.31 -0.4
886,224 + B158DRAFT_0868 0.48 +0.1
886,254 - B158DRAFT_0868 0.52 -1.1
886,307 + B158DRAFT_0868 0.59 -0.9
886,341 + B158DRAFT_0868 0.64 +1.6
886,341 + B158DRAFT_0868 0.64 +0.3
886,346 + B158DRAFT_0868 0.65 -0.9
886,351 - B158DRAFT_0868 0.66 -1.8
886,404 - B158DRAFT_0868 0.73 -1.9
886,470 - B158DRAFT_0868 0.82 -1.0
886,507 + B158DRAFT_0868 0.88 +0.3
886,507 + B158DRAFT_0868 0.88 +0.4
886,507 + B158DRAFT_0868 0.88 -1.0
886,512 + B158DRAFT_0868 0.88 +0.5
886,512 + B158DRAFT_0868 0.88 +0.3
886,512 + B158DRAFT_0868 0.88 -0.1
886,515 - B158DRAFT_0868 0.89 -1.5
886,515 - B158DRAFT_0868 0.89 +0.1
886,515 - B158DRAFT_0868 0.89 -0.9
886,515 - B158DRAFT_0868 0.89 +1.7
886,567 + +0.1
886,575 - -0.3
887,359 + -0.2
887,381 + -1.6
887,381 + -0.3
887,397 - +0.2
887,436 + B158DRAFT_0870 0.15 -0.7
887,436 + B158DRAFT_0870 0.15 -0.1
887,530 + B158DRAFT_0870 0.38 +0.9
887,534 - B158DRAFT_0870 0.39 -0.1
887,555 - B158DRAFT_0870 0.44 +0.4
887,559 + B158DRAFT_0870 0.45 +0.3
887,559 + B158DRAFT_0870 0.45 -0.3
887,566 + B158DRAFT_0870 0.47 +0.0
887,566 + B158DRAFT_0870 0.47 +0.4
887,567 - B158DRAFT_0870 0.47 -0.3
887,574 - B158DRAFT_0870 0.49 -0.6

Or see this region's nucleotide sequence