Experiment: marine_broth_2216 with Chloride 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0627 and B158DRAFT_0628 overlap by 22 nucleotides B158DRAFT_0628 and B158DRAFT_0629 overlap by 10 nucleotides B158DRAFT_0629 and B158DRAFT_0630 are separated by 43 nucleotides
B158DRAFT_0627: B158DRAFT_0627 - Cyclopropane fatty acid synthase and related methyltransferases, at 635,862 to 637,181
_0627
B158DRAFT_0628: B158DRAFT_0628 - Protein of unknown function (DUF2878)., at 637,160 to 637,726
_0628
B158DRAFT_0629: B158DRAFT_0629 - Predicted membrane protein, at 637,717 to 638,490
_0629
B158DRAFT_0630: B158DRAFT_0630 - Cyclopropane fatty acid synthase and related methyltransferases, at 638,534 to 639,568
_0630
Position (kb) 637
638 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 636.161 kb on - strand, within B158DRAFT_0627 at 636.224 kb on - strand, within B158DRAFT_0627 at 636.240 kb on - strand, within B158DRAFT_0627 at 636.310 kb on + strand, within B158DRAFT_0627 at 636.417 kb on + strand, within B158DRAFT_0627 at 636.422 kb on + strand, within B158DRAFT_0627 at 636.422 kb on + strand, within B158DRAFT_0627 at 636.422 kb on + strand, within B158DRAFT_0627 at 636.422 kb on + strand, within B158DRAFT_0627 at 636.422 kb on + strand, within B158DRAFT_0627 at 636.422 kb on + strand, within B158DRAFT_0627 at 636.422 kb on + strand, within B158DRAFT_0627 at 636.422 kb on + strand, within B158DRAFT_0627 at 636.422 kb on + strand, within B158DRAFT_0627 at 636.430 kb on - strand, within B158DRAFT_0627 at 636.430 kb on - strand, within B158DRAFT_0627 at 636.430 kb on - strand, within B158DRAFT_0627 at 636.430 kb on - strand, within B158DRAFT_0627 at 636.430 kb on - strand, within B158DRAFT_0627 at 636.430 kb on - strand, within B158DRAFT_0627 at 636.430 kb on - strand, within B158DRAFT_0627 at 636.430 kb on - strand, within B158DRAFT_0627 at 636.639 kb on - strand, within B158DRAFT_0627 at 636.789 kb on + strand, within B158DRAFT_0627 at 636.888 kb on - strand, within B158DRAFT_0627 at 636.900 kb on - strand, within B158DRAFT_0627 at 637.036 kb on + strand, within B158DRAFT_0627 at 637.036 kb on + strand, within B158DRAFT_0627 at 637.043 kb on - strand, within B158DRAFT_0627 at 637.116 kb on + strand at 637.125 kb on - strand at 637.228 kb on + strand, within B158DRAFT_0628 at 637.382 kb on - strand, within B158DRAFT_0628 at 637.382 kb on - strand, within B158DRAFT_0628 at 637.464 kb on + strand, within B158DRAFT_0628 at 637.586 kb on + strand, within B158DRAFT_0628 at 637.699 kb on + strand at 637.770 kb on + strand at 637.781 kb on + strand at 637.781 kb on + strand at 637.881 kb on - strand, within B158DRAFT_0629 at 637.933 kb on - strand, within B158DRAFT_0629 at 638.067 kb on - strand, within B158DRAFT_0629 at 638.067 kb on - strand, within B158DRAFT_0629 at 638.067 kb on - strand, within B158DRAFT_0629 at 638.076 kb on + strand, within B158DRAFT_0629 at 638.084 kb on - strand, within B158DRAFT_0629 at 638.140 kb on - strand, within B158DRAFT_0629 at 638.207 kb on - strand, within B158DRAFT_0629 at 638.528 kb on + strand at 638.528 kb on + strand at 638.536 kb on - strand at 638.536 kb on - strand at 638.601 kb on + strand at 638.647 kb on - strand, within B158DRAFT_0630 at 638.654 kb on - strand, within B158DRAFT_0630
Per-strain Table
Position Strand Gene LocusTag Fraction marine_broth_2216 with Chloride 500 mM remove 636,161 - B158DRAFT_0627 0.23 -0.8 636,224 - B158DRAFT_0627 0.27 -1.3 636,240 - B158DRAFT_0627 0.29 -0.9 636,310 + B158DRAFT_0627 0.34 -0.5 636,417 + B158DRAFT_0627 0.42 +0.3 636,422 + B158DRAFT_0627 0.42 -0.3 636,422 + B158DRAFT_0627 0.42 -1.1 636,422 + B158DRAFT_0627 0.42 -0.3 636,422 + B158DRAFT_0627 0.42 -2.5 636,422 + B158DRAFT_0627 0.42 -0.6 636,422 + B158DRAFT_0627 0.42 -0.5 636,422 + B158DRAFT_0627 0.42 -0.9 636,422 + B158DRAFT_0627 0.42 +0.5 636,422 + B158DRAFT_0627 0.42 +0.2 636,430 - B158DRAFT_0627 0.43 -0.8 636,430 - B158DRAFT_0627 0.43 -0.2 636,430 - B158DRAFT_0627 0.43 -0.4 636,430 - B158DRAFT_0627 0.43 -0.1 636,430 - B158DRAFT_0627 0.43 +0.7 636,430 - B158DRAFT_0627 0.43 -4.5 636,430 - B158DRAFT_0627 0.43 -1.1 636,430 - B158DRAFT_0627 0.43 -0.8 636,639 - B158DRAFT_0627 0.59 -0.8 636,789 + B158DRAFT_0627 0.70 +0.0 636,888 - B158DRAFT_0627 0.78 -0.8 636,900 - B158DRAFT_0627 0.79 +0.1 637,036 + B158DRAFT_0627 0.89 -0.6 637,036 + B158DRAFT_0627 0.89 -0.6 637,043 - B158DRAFT_0627 0.89 -0.8 637,116 + -1.1 637,125 - -0.0 637,228 + B158DRAFT_0628 0.12 -1.2 637,382 - B158DRAFT_0628 0.39 -0.1 637,382 - B158DRAFT_0628 0.39 -0.9 637,464 + B158DRAFT_0628 0.54 -1.0 637,586 + B158DRAFT_0628 0.75 -0.4 637,699 + -0.0 637,770 + +0.5 637,781 + +1.3 637,781 + +0.3 637,881 - B158DRAFT_0629 0.21 +0.0 637,933 - B158DRAFT_0629 0.28 -1.7 638,067 - B158DRAFT_0629 0.45 +0.3 638,067 - B158DRAFT_0629 0.45 +1.2 638,067 - B158DRAFT_0629 0.45 +0.1 638,076 + B158DRAFT_0629 0.46 -0.1 638,084 - B158DRAFT_0629 0.47 -0.1 638,140 - B158DRAFT_0629 0.55 -0.3 638,207 - B158DRAFT_0629 0.63 +0.1 638,528 + -0.8 638,528 + -0.3 638,536 - +0.7 638,536 - +0.3 638,601 + -0.2 638,647 - B158DRAFT_0630 0.11 -1.4 638,654 - B158DRAFT_0630 0.12 +0.7
Or see this region's nucleotide sequence