Experiment: marine_broth_2216 with Chloride 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0563 and B158DRAFT_0564 are separated by 100 nucleotides B158DRAFT_0564 and B158DRAFT_0565 are separated by 165 nucleotides B158DRAFT_0565 and B158DRAFT_0566 are separated by 140 nucleotides
B158DRAFT_0563: B158DRAFT_0563 - hypothetical protein, at 567,440 to 567,931
_0563
B158DRAFT_0564: B158DRAFT_0564 - Acetyltransferases, including N-acetylases of ribosomal proteins, at 568,032 to 568,538
_0564
B158DRAFT_0565: B158DRAFT_0565 - malate dehydrogenase, at 568,704 to 569,681
_0565
B158DRAFT_0566: B158DRAFT_0566 - ATP-dependent DNA helicase RecG (EC 3.6.1.-), at 569,822 to 571,924
_0566
Position (kb) 568
569
570 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 567.733 kb on - strand, within B158DRAFT_0563 at 567.757 kb on - strand, within B158DRAFT_0563 at 567.791 kb on + strand, within B158DRAFT_0563 at 567.791 kb on + strand, within B158DRAFT_0563 at 567.791 kb on + strand, within B158DRAFT_0563 at 567.791 kb on + strand, within B158DRAFT_0563 at 567.791 kb on + strand, within B158DRAFT_0563 at 567.986 kb on + strand at 567.986 kb on + strand at 567.986 kb on + strand at 567.986 kb on + strand at 567.994 kb on - strand at 568.031 kb on - strand at 568.035 kb on + strand at 568.067 kb on + strand at 568.067 kb on + strand at 568.067 kb on + strand at 568.072 kb on - strand at 568.106 kb on + strand, within B158DRAFT_0564 at 568.239 kb on + strand, within B158DRAFT_0564 at 568.246 kb on + strand, within B158DRAFT_0564 at 568.247 kb on - strand, within B158DRAFT_0564 at 568.258 kb on + strand, within B158DRAFT_0564 at 568.292 kb on + strand, within B158DRAFT_0564 at 568.300 kb on - strand, within B158DRAFT_0564 at 568.300 kb on - strand, within B158DRAFT_0564 at 568.467 kb on - strand, within B158DRAFT_0564 at 568.558 kb on + strand at 568.566 kb on - strand at 568.693 kb on + strand at 568.715 kb on - strand at 569.820 kb on + strand at 569.820 kb on + strand at 569.820 kb on + strand at 569.820 kb on + strand at 569.820 kb on + strand at 569.820 kb on + strand at 569.820 kb on + strand at 569.820 kb on + strand at 569.820 kb on + strand at 569.828 kb on - strand at 569.828 kb on - strand at 569.828 kb on - strand at 569.828 kb on - strand at 569.828 kb on - strand at 569.828 kb on - strand at 569.828 kb on - strand at 569.828 kb on - strand at 569.828 kb on - strand at 569.953 kb on - strand at 569.972 kb on + strand at 570.028 kb on - strand at 570.077 kb on - strand, within B158DRAFT_0566 at 570.077 kb on - strand, within B158DRAFT_0566 at 570.110 kb on + strand, within B158DRAFT_0566 at 570.116 kb on - strand, within B158DRAFT_0566 at 570.183 kb on - strand, within B158DRAFT_0566 at 570.208 kb on + strand, within B158DRAFT_0566 at 570.208 kb on + strand, within B158DRAFT_0566 at 570.208 kb on + strand, within B158DRAFT_0566 at 570.229 kb on + strand, within B158DRAFT_0566 at 570.229 kb on + strand, within B158DRAFT_0566 at 570.229 kb on + strand, within B158DRAFT_0566 at 570.258 kb on - strand, within B158DRAFT_0566 at 570.260 kb on - strand, within B158DRAFT_0566 at 570.264 kb on + strand, within B158DRAFT_0566 at 570.318 kb on + strand, within B158DRAFT_0566 at 570.318 kb on + strand, within B158DRAFT_0566 at 570.318 kb on + strand, within B158DRAFT_0566 at 570.318 kb on + strand, within B158DRAFT_0566 at 570.318 kb on + strand, within B158DRAFT_0566 at 570.318 kb on + strand, within B158DRAFT_0566 at 570.326 kb on - strand, within B158DRAFT_0566 at 570.326 kb on - strand, within B158DRAFT_0566 at 570.326 kb on - strand, within B158DRAFT_0566 at 570.326 kb on - strand, within B158DRAFT_0566 at 570.326 kb on - strand, within B158DRAFT_0566 at 570.340 kb on + strand, within B158DRAFT_0566 at 570.340 kb on + strand, within B158DRAFT_0566 at 570.348 kb on - strand, within B158DRAFT_0566 at 570.369 kb on - strand, within B158DRAFT_0566 at 570.441 kb on + strand, within B158DRAFT_0566 at 570.441 kb on + strand, within B158DRAFT_0566 at 570.517 kb on + strand, within B158DRAFT_0566 at 570.517 kb on + strand, within B158DRAFT_0566 at 570.517 kb on + strand, within B158DRAFT_0566 at 570.517 kb on + strand, within B158DRAFT_0566 at 570.517 kb on + strand, within B158DRAFT_0566 at 570.517 kb on + strand, within B158DRAFT_0566 at 570.517 kb on + strand, within B158DRAFT_0566 at 570.517 kb on + strand, within B158DRAFT_0566 at 570.517 kb on + strand, within B158DRAFT_0566 at 570.517 kb on + strand, within B158DRAFT_0566 at 570.517 kb on + strand, within B158DRAFT_0566 at 570.517 kb on + strand, within B158DRAFT_0566 at 570.517 kb on + strand, within B158DRAFT_0566 at 570.517 kb on + strand, within B158DRAFT_0566 at 570.525 kb on + strand, within B158DRAFT_0566 at 570.525 kb on - strand, within B158DRAFT_0566 at 570.525 kb on - strand, within B158DRAFT_0566 at 570.525 kb on - strand, within B158DRAFT_0566 at 570.525 kb on - strand, within B158DRAFT_0566 at 570.525 kb on - strand, within B158DRAFT_0566 at 570.525 kb on - strand, within B158DRAFT_0566 at 570.525 kb on - strand, within B158DRAFT_0566 at 570.525 kb on - strand, within B158DRAFT_0566 at 570.525 kb on - strand, within B158DRAFT_0566 at 570.525 kb on - strand, within B158DRAFT_0566 at 570.525 kb on - strand, within B158DRAFT_0566 at 570.537 kb on - strand, within B158DRAFT_0566 at 570.591 kb on + strand, within B158DRAFT_0566 at 570.595 kb on + strand, within B158DRAFT_0566 at 570.595 kb on + strand, within B158DRAFT_0566 at 570.595 kb on + strand, within B158DRAFT_0566 at 570.595 kb on + strand, within B158DRAFT_0566 at 570.595 kb on + strand, within B158DRAFT_0566 at 570.602 kb on + strand, within B158DRAFT_0566 at 570.603 kb on - strand, within B158DRAFT_0566 at 570.603 kb on - strand, within B158DRAFT_0566 at 570.605 kb on - strand, within B158DRAFT_0566 at 570.624 kb on - strand, within B158DRAFT_0566
Per-strain Table
Position Strand Gene LocusTag Fraction marine_broth_2216 with Chloride 500 mM remove 567,733 - B158DRAFT_0563 0.60 -0.1 567,757 - B158DRAFT_0563 0.64 +0.6 567,791 + B158DRAFT_0563 0.71 +1.7 567,791 + B158DRAFT_0563 0.71 +0.2 567,791 + B158DRAFT_0563 0.71 -1.4 567,791 + B158DRAFT_0563 0.71 -0.2 567,791 + B158DRAFT_0563 0.71 +0.0 567,986 + -0.0 567,986 + +0.3 567,986 + +0.3 567,986 + -0.1 567,994 - -0.2 568,031 - +0.5 568,035 + +0.3 568,067 + -0.1 568,067 + +0.2 568,067 + -0.5 568,072 - -0.2 568,106 + B158DRAFT_0564 0.15 -0.4 568,239 + B158DRAFT_0564 0.41 +0.5 568,246 + B158DRAFT_0564 0.42 +0.1 568,247 - B158DRAFT_0564 0.42 -1.0 568,258 + B158DRAFT_0564 0.45 +0.1 568,292 + B158DRAFT_0564 0.51 -1.1 568,300 - B158DRAFT_0564 0.53 -0.1 568,300 - B158DRAFT_0564 0.53 +0.3 568,467 - B158DRAFT_0564 0.86 +0.0 568,558 + +0.4 568,566 - +1.1 568,693 + -0.1 568,715 - -0.9 569,820 + -0.3 569,820 + +0.5 569,820 + -2.6 569,820 + -0.1 569,820 + -0.5 569,820 + -0.1 569,820 + +0.4 569,820 + -1.4 569,820 + -1.4 569,828 - -2.4 569,828 - +0.9 569,828 - -3.2 569,828 - -2.5 569,828 - -0.3 569,828 - +0.0 569,828 - -2.7 569,828 - +0.2 569,828 - +0.3 569,953 - -1.4 569,972 + -3.5 570,028 - -1.5 570,077 - B158DRAFT_0566 0.12 -1.8 570,077 - B158DRAFT_0566 0.12 -0.7 570,110 + B158DRAFT_0566 0.14 -1.8 570,116 - B158DRAFT_0566 0.14 -0.2 570,183 - B158DRAFT_0566 0.17 -1.2 570,208 + B158DRAFT_0566 0.18 +2.7 570,208 + B158DRAFT_0566 0.18 -2.9 570,208 + B158DRAFT_0566 0.18 -0.9 570,229 + B158DRAFT_0566 0.19 -1.7 570,229 + B158DRAFT_0566 0.19 +0.9 570,229 + B158DRAFT_0566 0.19 -0.4 570,258 - B158DRAFT_0566 0.21 +0.1 570,260 - B158DRAFT_0566 0.21 -0.9 570,264 + B158DRAFT_0566 0.21 -0.3 570,318 + B158DRAFT_0566 0.24 -1.3 570,318 + B158DRAFT_0566 0.24 -0.9 570,318 + B158DRAFT_0566 0.24 -0.3 570,318 + B158DRAFT_0566 0.24 -1.7 570,318 + B158DRAFT_0566 0.24 +0.7 570,318 + B158DRAFT_0566 0.24 -1.9 570,326 - B158DRAFT_0566 0.24 -0.9 570,326 - B158DRAFT_0566 0.24 +0.2 570,326 - B158DRAFT_0566 0.24 -0.4 570,326 - B158DRAFT_0566 0.24 -1.1 570,326 - B158DRAFT_0566 0.24 -0.9 570,340 + B158DRAFT_0566 0.25 -1.1 570,340 + B158DRAFT_0566 0.25 -1.5 570,348 - B158DRAFT_0566 0.25 -2.3 570,369 - B158DRAFT_0566 0.26 -1.6 570,441 + B158DRAFT_0566 0.29 -1.1 570,441 + B158DRAFT_0566 0.29 -1.0 570,517 + B158DRAFT_0566 0.33 -0.0 570,517 + B158DRAFT_0566 0.33 -0.8 570,517 + B158DRAFT_0566 0.33 -0.9 570,517 + B158DRAFT_0566 0.33 -1.4 570,517 + B158DRAFT_0566 0.33 -2.1 570,517 + B158DRAFT_0566 0.33 -0.8 570,517 + B158DRAFT_0566 0.33 -1.9 570,517 + B158DRAFT_0566 0.33 -1.5 570,517 + B158DRAFT_0566 0.33 -0.9 570,517 + B158DRAFT_0566 0.33 -0.3 570,517 + B158DRAFT_0566 0.33 -0.2 570,517 + B158DRAFT_0566 0.33 -0.5 570,517 + B158DRAFT_0566 0.33 +0.1 570,517 + B158DRAFT_0566 0.33 -0.6 570,525 + B158DRAFT_0566 0.33 -1.7 570,525 - B158DRAFT_0566 0.33 -1.6 570,525 - B158DRAFT_0566 0.33 -1.9 570,525 - B158DRAFT_0566 0.33 -0.8 570,525 - B158DRAFT_0566 0.33 -0.8 570,525 - B158DRAFT_0566 0.33 -2.2 570,525 - B158DRAFT_0566 0.33 -2.8 570,525 - B158DRAFT_0566 0.33 +0.3 570,525 - B158DRAFT_0566 0.33 -0.8 570,525 - B158DRAFT_0566 0.33 -0.9 570,525 - B158DRAFT_0566 0.33 -0.6 570,525 - B158DRAFT_0566 0.33 -2.1 570,537 - B158DRAFT_0566 0.34 -1.5 570,591 + B158DRAFT_0566 0.37 -1.8 570,595 + B158DRAFT_0566 0.37 -1.5 570,595 + B158DRAFT_0566 0.37 -0.5 570,595 + B158DRAFT_0566 0.37 -2.6 570,595 + B158DRAFT_0566 0.37 -0.5 570,595 + B158DRAFT_0566 0.37 -0.5 570,602 + B158DRAFT_0566 0.37 -0.5 570,603 - B158DRAFT_0566 0.37 -0.9 570,603 - B158DRAFT_0566 0.37 -1.8 570,605 - B158DRAFT_0566 0.37 -1.0 570,624 - B158DRAFT_0566 0.38 -1.1
Or see this region's nucleotide sequence