Experiment: R2A with Strontium chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu2694 and Atu2695 overlap by 4 nucleotides Atu2695 and Atu2696 are separated by 122 nucleotides
Atu2694: Atu2694 - hypothetical protein, at 2,678,342 to 2,679,616
Atu2694
Atu2695: Atu2695 - diaminopimelate epimerase, at 2,679,613 to 2,680,512
Atu2695
Atu2696: Atu2696 - hypothetical protein, at 2,680,635 to 2,681,705
Atu2696
Position (kb)
2679
2680
2681 Strain fitness (log2 ratio)
-1
0
1 at 2679.032 kb on - strand, within Atu2694 at 2680.531 kb on - strand at 2680.684 kb on - strand at 2680.699 kb on - strand at 2680.717 kb on + strand at 2680.719 kb on + strand at 2680.720 kb on - strand at 2680.761 kb on - strand, within Atu2696 at 2680.796 kb on - strand, within Atu2696 at 2680.808 kb on + strand, within Atu2696 at 2680.808 kb on + strand, within Atu2696 at 2680.808 kb on + strand, within Atu2696 at 2680.809 kb on - strand, within Atu2696 at 2680.810 kb on + strand, within Atu2696 at 2680.816 kb on - strand, within Atu2696 at 2680.853 kb on + strand, within Atu2696 at 2680.853 kb on + strand, within Atu2696 at 2680.853 kb on + strand, within Atu2696 at 2680.853 kb on + strand, within Atu2696 at 2680.861 kb on - strand, within Atu2696 at 2680.861 kb on - strand, within Atu2696 at 2680.861 kb on - strand, within Atu2696 at 2680.861 kb on - strand, within Atu2696 at 2680.876 kb on - strand, within Atu2696 at 2680.897 kb on + strand, within Atu2696 at 2680.902 kb on + strand, within Atu2696 at 2680.906 kb on + strand, within Atu2696 at 2681.017 kb on + strand, within Atu2696 at 2681.025 kb on - strand, within Atu2696 at 2681.030 kb on + strand, within Atu2696 at 2681.052 kb on + strand, within Atu2696 at 2681.057 kb on - strand, within Atu2696 at 2681.106 kb on - strand, within Atu2696 at 2681.109 kb on + strand, within Atu2696 at 2681.171 kb on - strand, within Atu2696 at 2681.240 kb on + strand, within Atu2696 at 2681.240 kb on - strand, within Atu2696 at 2681.247 kb on - strand, within Atu2696 at 2681.253 kb on - strand, within Atu2696 at 2681.299 kb on + strand, within Atu2696 at 2681.342 kb on + strand, within Atu2696 at 2681.355 kb on - strand, within Atu2696 at 2681.378 kb on - strand, within Atu2696 at 2681.400 kb on + strand, within Atu2696 at 2681.482 kb on + strand, within Atu2696 at 2681.490 kb on - strand, within Atu2696
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with Strontium chloride 750 mM remove 2,679,032 - Atu2694 0.54 -1.1 2,680,531 - -0.5 2,680,684 - +0.0 2,680,699 - -0.6 2,680,717 + -0.0 2,680,719 + +0.7 2,680,720 - +0.3 2,680,761 - Atu2696 0.12 +0.1 2,680,796 - Atu2696 0.15 -0.3 2,680,808 + Atu2696 0.16 -0.3 2,680,808 + Atu2696 0.16 +0.2 2,680,808 + Atu2696 0.16 -0.3 2,680,809 - Atu2696 0.16 -0.6 2,680,810 + Atu2696 0.16 -0.6 2,680,816 - Atu2696 0.17 -0.5 2,680,853 + Atu2696 0.20 -0.3 2,680,853 + Atu2696 0.20 -0.6 2,680,853 + Atu2696 0.20 -0.1 2,680,853 + Atu2696 0.20 -0.2 2,680,861 - Atu2696 0.21 +0.6 2,680,861 - Atu2696 0.21 -0.5 2,680,861 - Atu2696 0.21 -0.4 2,680,861 - Atu2696 0.21 +0.6 2,680,876 - Atu2696 0.23 +0.2 2,680,897 + Atu2696 0.24 +1.1 2,680,902 + Atu2696 0.25 -0.5 2,680,906 + Atu2696 0.25 +0.3 2,681,017 + Atu2696 0.36 -0.2 2,681,025 - Atu2696 0.36 -0.3 2,681,030 + Atu2696 0.37 -0.4 2,681,052 + Atu2696 0.39 +0.5 2,681,057 - Atu2696 0.39 +0.1 2,681,106 - Atu2696 0.44 +0.1 2,681,109 + Atu2696 0.44 -0.1 2,681,171 - Atu2696 0.50 +0.5 2,681,240 + Atu2696 0.56 +0.3 2,681,240 - Atu2696 0.56 -0.1 2,681,247 - Atu2696 0.57 +0.2 2,681,253 - Atu2696 0.58 -0.7 2,681,299 + Atu2696 0.62 -0.1 2,681,342 + Atu2696 0.66 -0.0 2,681,355 - Atu2696 0.67 +1.1 2,681,378 - Atu2696 0.69 +0.7 2,681,400 + Atu2696 0.71 +0.3 2,681,482 + Atu2696 0.79 +0.3 2,681,490 - Atu2696 0.80 +0.2
Or see this region's nucleotide sequence