Experiment: R2A with Strontium chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu0708 and Atu0709 are separated by 116 nucleotides Atu0709 and Atu0710 are separated by 287 nucleotides
Atu0708: Atu0708 - ABC transporter, nucleotide binding/ATPase protein, at 707,905 to 709,128
Atu0708
Atu0709: Atu0709 - mrp protein, at 709,245 to 710,411
Atu0709
Atu0710: Atu0710 - magnesium/cobalt transport protein, at 710,699 to 711,727
Atu0710
Position (kb) 709
710
711 Strain fitness (log2 ratio) -1
0
1
2
3 at 708.247 kb on + strand, within Atu0708 at 708.267 kb on - strand, within Atu0708 at 708.342 kb on + strand, within Atu0708 at 708.342 kb on + strand, within Atu0708 at 708.342 kb on + strand, within Atu0708 at 708.342 kb on + strand, within Atu0708 at 708.342 kb on + strand, within Atu0708 at 708.342 kb on + strand, within Atu0708 at 708.342 kb on + strand, within Atu0708 at 708.342 kb on + strand, within Atu0708 at 708.350 kb on - strand, within Atu0708 at 708.350 kb on - strand, within Atu0708 at 708.350 kb on - strand, within Atu0708 at 708.350 kb on - strand, within Atu0708 at 708.350 kb on - strand, within Atu0708 at 708.350 kb on - strand, within Atu0708 at 708.371 kb on - strand, within Atu0708 at 708.437 kb on - strand, within Atu0708 at 708.465 kb on + strand, within Atu0708 at 708.488 kb on + strand, within Atu0708 at 708.498 kb on + strand, within Atu0708 at 708.569 kb on - strand, within Atu0708 at 708.569 kb on - strand, within Atu0708 at 708.640 kb on + strand, within Atu0708 at 708.648 kb on - strand, within Atu0708 at 708.648 kb on - strand, within Atu0708 at 708.697 kb on + strand, within Atu0708 at 708.705 kb on - strand, within Atu0708 at 708.705 kb on - strand, within Atu0708 at 708.729 kb on - strand, within Atu0708 at 708.803 kb on + strand, within Atu0708 at 708.811 kb on - strand, within Atu0708 at 708.838 kb on + strand, within Atu0708 at 708.917 kb on - strand, within Atu0708 at 708.917 kb on - strand, within Atu0708 at 708.994 kb on - strand, within Atu0708 at 709.018 kb on - strand at 709.217 kb on + strand at 709.217 kb on + strand at 710.368 kb on + strand at 710.451 kb on + strand at 710.589 kb on + strand at 710.624 kb on + strand at 710.624 kb on + strand at 710.636 kb on + strand at 710.639 kb on - strand at 710.639 kb on - strand at 710.639 kb on - strand at 710.664 kb on - strand at 710.677 kb on - strand at 710.684 kb on - strand at 710.707 kb on - strand at 710.717 kb on + strand at 710.800 kb on - strand at 710.848 kb on - strand, within Atu0710 at 710.917 kb on + strand, within Atu0710 at 710.917 kb on + strand, within Atu0710 at 710.949 kb on + strand, within Atu0710 at 711.017 kb on - strand, within Atu0710 at 711.064 kb on + strand, within Atu0710 at 711.163 kb on - strand, within Atu0710 at 711.262 kb on + strand, within Atu0710 at 711.332 kb on - strand, within Atu0710 at 711.350 kb on - strand, within Atu0710 at 711.403 kb on + strand, within Atu0710 at 711.403 kb on - strand, within Atu0710
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with Strontium chloride 750 mM remove 708,247 + Atu0708 0.28 -0.1 708,267 - Atu0708 0.30 -0.0 708,342 + Atu0708 0.36 -1.0 708,342 + Atu0708 0.36 +0.9 708,342 + Atu0708 0.36 +0.1 708,342 + Atu0708 0.36 +0.7 708,342 + Atu0708 0.36 +0.8 708,342 + Atu0708 0.36 +0.8 708,342 + Atu0708 0.36 -1.4 708,342 + Atu0708 0.36 -0.7 708,350 - Atu0708 0.36 -0.7 708,350 - Atu0708 0.36 +0.3 708,350 - Atu0708 0.36 +1.4 708,350 - Atu0708 0.36 +0.8 708,350 - Atu0708 0.36 +0.2 708,350 - Atu0708 0.36 -0.1 708,371 - Atu0708 0.38 +0.3 708,437 - Atu0708 0.43 +0.4 708,465 + Atu0708 0.46 -1.6 708,488 + Atu0708 0.48 +0.7 708,498 + Atu0708 0.48 +0.2 708,569 - Atu0708 0.54 +0.8 708,569 - Atu0708 0.54 +0.2 708,640 + Atu0708 0.60 -0.5 708,648 - Atu0708 0.61 +1.8 708,648 - Atu0708 0.61 -0.1 708,697 + Atu0708 0.65 +0.2 708,705 - Atu0708 0.65 +0.2 708,705 - Atu0708 0.65 +0.2 708,729 - Atu0708 0.67 -0.0 708,803 + Atu0708 0.73 +1.0 708,811 - Atu0708 0.74 -0.6 708,838 + Atu0708 0.76 +0.4 708,917 - Atu0708 0.83 +0.4 708,917 - Atu0708 0.83 +0.5 708,994 - Atu0708 0.89 -0.4 709,018 - +1.3 709,217 + +0.2 709,217 + +1.3 710,368 + +0.0 710,451 + -0.7 710,589 + +0.1 710,624 + +0.1 710,624 + +0.3 710,636 + +0.3 710,639 - +0.3 710,639 - +0.2 710,639 - -0.1 710,664 - +0.0 710,677 - +3.0 710,684 - +0.3 710,707 - +1.1 710,717 + -1.1 710,800 - +0.7 710,848 - Atu0710 0.14 +0.4 710,917 + Atu0710 0.21 -0.3 710,917 + Atu0710 0.21 -0.1 710,949 + Atu0710 0.24 +0.2 711,017 - Atu0710 0.31 -0.1 711,064 + Atu0710 0.35 -0.2 711,163 - Atu0710 0.45 -0.2 711,262 + Atu0710 0.55 +0.0 711,332 - Atu0710 0.62 -1.0 711,350 - Atu0710 0.63 +0.2 711,403 + Atu0710 0.68 +0.1 711,403 - Atu0710 0.68 -1.2
Or see this region's nucleotide sequence