Experiment: LB_plus_SM_buffer with Ffm_phage 18.75 MOI
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF659 and GFF660 are separated by 0 nucleotides GFF660 and GFF661 are separated by 121 nucleotides GFF661 and GFF662 are separated by 143 nucleotides
GFF659 - Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1), at 14,204 to 15,262
GFF659
GFF660 - Putative phosphatase, at 15,263 to 16,123
GFF660
GFF661 - 6-phosphogluconolactonase (EC 3.1.1.31), at 16,245 to 17,240
GFF661
GFF662 - Pectinesterase (EC 3.1.1.11), at 17,384 to 18,667
GFF662
Position (kb) 16
17
18 Strain fitness (log2 ratio) -2
-1
0
1
2 at 15.266 kb on + strand at 15.413 kb on - strand, within GFF660 at 15.665 kb on - strand, within GFF660 at 15.713 kb on - strand, within GFF660 at 15.762 kb on + strand, within GFF660 at 15.762 kb on + strand, within GFF660 at 15.762 kb on + strand, within GFF660 at 15.763 kb on - strand, within GFF660 at 15.763 kb on - strand, within GFF660 at 15.763 kb on - strand, within GFF660 at 15.763 kb on - strand, within GFF660 at 15.794 kb on + strand, within GFF660 at 15.935 kb on - strand, within GFF660 at 16.028 kb on - strand, within GFF660 at 16.041 kb on - strand at 16.105 kb on + strand at 16.196 kb on - strand at 16.240 kb on + strand at 16.241 kb on - strand at 16.390 kb on - strand, within GFF661 at 16.396 kb on - strand, within GFF661 at 16.436 kb on + strand, within GFF661 at 16.437 kb on - strand, within GFF661 at 16.503 kb on - strand, within GFF661 at 16.548 kb on - strand, within GFF661 at 16.815 kb on + strand, within GFF661 at 16.900 kb on - strand, within GFF661 at 16.950 kb on - strand, within GFF661 at 16.975 kb on - strand, within GFF661 at 16.975 kb on - strand, within GFF661 at 17.012 kb on + strand, within GFF661 at 17.036 kb on - strand, within GFF661 at 17.236 kb on - strand at 17.417 kb on + strand at 17.417 kb on + strand at 17.418 kb on - strand at 17.452 kb on - strand at 17.452 kb on - strand at 17.507 kb on - strand at 17.704 kb on + strand, within GFF662 at 17.705 kb on - strand, within GFF662 at 17.734 kb on - strand, within GFF662 at 17.830 kb on + strand, within GFF662 at 17.833 kb on - strand, within GFF662 at 17.851 kb on + strand, within GFF662 at 17.852 kb on - strand, within GFF662 at 18.084 kb on - strand, within GFF662 at 18.127 kb on + strand, within GFF662 at 18.127 kb on + strand, within GFF662 at 18.129 kb on + strand, within GFF662 at 18.130 kb on - strand, within GFF662 at 18.151 kb on + strand, within GFF662 at 18.152 kb on - strand, within GFF662 at 18.153 kb on + strand, within GFF662 at 18.154 kb on - strand, within GFF662
Per-strain Table
Position Strand Gene LocusTag Fraction LB_plus_SM_buffer with Ffm_phage 18.75 MOI remove 15,266 + -0.0 15,413 - GFF660 0.17 +0.8 15,665 - GFF660 0.47 +0.4 15,713 - GFF660 0.52 +0.4 15,762 + GFF660 0.58 -0.8 15,762 + GFF660 0.58 -0.1 15,762 + GFF660 0.58 -0.1 15,763 - GFF660 0.58 -0.5 15,763 - GFF660 0.58 -0.3 15,763 - GFF660 0.58 +0.5 15,763 - GFF660 0.58 +0.3 15,794 + GFF660 0.62 -0.6 15,935 - GFF660 0.78 +0.6 16,028 - GFF660 0.89 -0.1 16,041 - +0.3 16,105 + +0.0 16,196 - -0.3 16,240 + +0.1 16,241 - -0.9 16,390 - GFF661 0.15 -0.2 16,396 - GFF661 0.15 -0.6 16,436 + GFF661 0.19 -1.0 16,437 - GFF661 0.19 +0.5 16,503 - GFF661 0.26 -0.2 16,548 - GFF661 0.30 -1.2 16,815 + GFF661 0.57 -1.6 16,900 - GFF661 0.66 -0.8 16,950 - GFF661 0.71 -0.7 16,975 - GFF661 0.73 -1.1 16,975 - GFF661 0.73 +0.3 17,012 + GFF661 0.77 -0.3 17,036 - GFF661 0.79 -0.2 17,236 - -0.5 17,417 + -0.7 17,417 + +0.2 17,418 - +0.2 17,452 - -0.3 17,452 - -0.2 17,507 - -0.4 17,704 + GFF662 0.25 +0.5 17,705 - GFF662 0.25 -0.7 17,734 - GFF662 0.27 -0.0 17,830 + GFF662 0.35 +0.6 17,833 - GFF662 0.35 -0.2 17,851 + GFF662 0.36 +1.4 17,852 - GFF662 0.36 +0.5 18,084 - GFF662 0.55 -0.1 18,127 + GFF662 0.58 -1.8 18,127 + GFF662 0.58 +0.3 18,129 + GFF662 0.58 +0.8 18,130 - GFF662 0.58 -0.2 18,151 + GFF662 0.60 +0.2 18,152 - GFF662 0.60 +0.3 18,153 + GFF662 0.60 +2.2 18,154 - GFF662 0.60 +0.4
Or see this region's nucleotide sequence