Strain Fitness in Escherichia coli BL21 around ECD_r00020
Experiment: Mixed culture, Halobacteriovorax-1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Mixed culture, Halobacteriovorax-1 |
---|---|---|---|---|---|
remove | |||||
4,115,333 | + | ECD_03883 | 0.86 | -0.2 | |
4,115,333 | + | ECD_03883 | 0.86 | -0.5 | |
4,115,333 | + | ECD_03883 | 0.86 | -2.8 | |
4,115,333 | + | ECD_03883 | 0.86 | +0.5 | |
4,115,334 | - | ECD_03883 | 0.86 | -0.8 | |
4,115,426 | + | -1.2 | |||
4,115,427 | - | -0.3 | |||
4,115,560 | + | -0.9 | |||
4,115,560 | + | -1.3 | |||
4,115,561 | - | -0.1 | |||
4,115,580 | - | -0.2 | |||
4,115,580 | - | +0.2 | |||
4,115,580 | - | -0.0 | |||
4,115,583 | - | -0.2 | |||
4,115,583 | - | +0.2 | |||
4,115,583 | - | +0.1 | |||
4,115,583 | - | -0.2 | |||
4,115,795 | + | -1.1 | |||
4,115,795 | + | -0.0 | |||
4,115,877 | - | -0.7 |
Or see this region's nucleotide sequence