Strain Fitness in Escherichia coli BL21 around ECD_04113

Experiment: Mixed culture, Halobacteriovorax-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture, Halobacteriovorax-1
4,382,134	+				-0.5
4,382,171	-				+0.0
4,382,284	+		ECD_04111	0.30	+0.3
4,382,285	-		ECD_04111	0.30	+0.9
4,382,285	-		ECD_04111	0.30	-0.4
4,382,339	+		ECD_04111	0.44	-0.6
4,382,385	+		ECD_04111	0.56	-2.0
4,382,480	+		ECD_04111	0.80	-0.1
4,382,481	-		ECD_04111	0.81	+0.8
4,382,481	-		ECD_04111	0.81	-0.4
4,382,481	-		ECD_04111	0.81	+0.1
4,382,503	-		ECD_04111	0.86	-1.2
4,382,503	-		ECD_04111	0.86	-0.9
4,382,568	-				+0.6
4,382,598	-				-0.1
4,382,617	-				-0.1
4,382,648	+				+0.3
4,382,671	+				+0.6
4,382,671	+				+0.0
4,382,671	+				-0.3
4,382,747	+		ECD_04112	0.26	+0.3
4,382,825	-		ECD_04112	0.43	-1.1
4,382,825	-		ECD_04112	0.43	+0.2
4,382,840	+		ECD_04112	0.46	+0.1
4,382,861	-		ECD_04112	0.50	-0.4
4,382,861	-		ECD_04112	0.50	+0.3
4,382,877	+		ECD_04112	0.54	-0.0
4,382,878	-		ECD_04112	0.54	+0.1
4,382,878	-		ECD_04112	0.54	-0.3
4,382,946	+		ECD_04112	0.69	+0.1
4,383,008	+		ECD_04112	0.82	+0.7
4,383,029	+		ECD_04112	0.87	-0.5
4,383,040	-		ECD_04112	0.89	+0.1
4,383,040	-		ECD_04112	0.89	+0.3
4,383,053	+				+1.1
4,383,056	+				+0.1
4,383,057	-				+0.3
4,383,057	-				+0.2
4,383,181	+				-1.6
4,383,200	+		ECD_04113	0.10	-1.2
4,383,358	+		ECD_04113	0.27	-1.5
4,383,392	+		ECD_04113	0.31	-1.3
4,383,393	-		ECD_04113	0.31	-0.9
4,383,393	-		ECD_04113	0.31	-0.7
4,383,446	-		ECD_04113	0.37	-0.8
4,383,446	-		ECD_04113	0.37	-0.8
4,383,481	+		ECD_04113	0.40	-1.7
4,383,482	-		ECD_04113	0.41	-1.4
4,383,670	-		ECD_04113	0.61	-1.2
4,383,730	-		ECD_04113	0.67	-1.4
4,383,742	+		ECD_04113	0.68	-2.3
4,383,742	+		ECD_04113	0.68	-1.3
4,383,743	-		ECD_04113	0.68	-0.6
4,383,743	-		ECD_04113	0.68	-0.9
4,383,800	+		ECD_04113	0.75	-1.0
4,384,010	+				-1.6
4,384,010	+				-1.1
4,384,011	-				-2.0
4,384,022	-				-2.3
4,384,176	-				+0.5
4,384,176	-				+1.3
4,384,176	-				+0.1
4,384,265	-				-0.2
4,384,418	+				+0.0
4,384,450	+				+0.5
4,384,457	+				+0.6
4,384,458	-				+0.3
4,384,458	-				+0.3
4,384,515	+		ECD_04115	0.15	-0.1
4,384,515	+		ECD_04115	0.15	+0.2
4,384,516	-		ECD_04115	0.15	+0.3
4,384,516	-		ECD_04115	0.15	+0.5
4,384,609	-		ECD_04115	0.39	+0.0
4,384,620	+		ECD_04115	0.41	-0.0
4,384,677	+		ECD_04115	0.56	+0.8
4,384,741	+		ECD_04115	0.72	+0.3
4,384,805	+		ECD_04115	0.88	+0.5
4,384,806	-		ECD_04115	0.88	-0.6
4,384,965	+				+0.0
4,384,966	-				+0.6
4,384,975	+				+0.9
4,385,008	+				+0.7
4,385,008	+				+0.9
4,385,009	-				-0.1
4,385,009	-				+0.1