Strain Fitness in Escherichia coli BL21 around ECD_04059

Experiment: Mixed culture, Halobacteriovorax-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture, Halobacteriovorax-1
4,324,088	+		ECD_04057	0.82	-0.2
4,324,171	-				-0.0
4,324,185	-				+0.1
4,324,350	-		ECD_04058	0.17	-0.7
4,324,350	-		ECD_04058	0.17	-1.5
4,324,422	-		ECD_04058	0.27	-1.3
4,324,431	-		ECD_04058	0.28	-0.9
4,324,431	-		ECD_04058	0.28	-0.2
4,324,431	-		ECD_04058	0.28	-1.0
4,324,467	-		ECD_04058	0.33	-0.6
4,324,487	-		ECD_04058	0.36	-0.2
4,324,487	-		ECD_04058	0.36	-0.1
4,324,541	-		ECD_04058	0.43	-0.1
4,324,589	-		ECD_04058	0.49	+0.8
4,324,607	-		ECD_04058	0.51	+0.4
4,324,607	-		ECD_04058	0.51	-0.6
4,324,611	-		ECD_04058	0.52	-0.5
4,324,611	-		ECD_04058	0.52	-1.3
4,324,684	-		ECD_04058	0.62	-0.2
4,324,684	-		ECD_04058	0.62	-1.2
4,324,732	-		ECD_04058	0.68	-0.9
4,324,732	-		ECD_04058	0.68	-0.8
4,324,800	-		ECD_04058	0.77	-0.5
4,324,800	-		ECD_04058	0.77	-0.5
4,325,009	+				-0.9
4,325,052	-				+0.0
4,325,070	+				+0.4
4,325,082	+				-0.3
4,325,083	-				+0.1
4,325,117	-				-0.0
4,325,145	+				+0.6
4,325,152	-				-0.3
4,325,206	+		ECD_04059	0.12	+0.5
4,325,224	-		ECD_04059	0.13	-0.1
4,325,224	-		ECD_04059	0.13	-0.3
4,325,297	-		ECD_04059	0.20	+0.0
4,325,401	-		ECD_04059	0.30	+0.4
4,325,451	+		ECD_04059	0.35	-0.0
4,325,451	+		ECD_04059	0.35	+0.6
4,325,452	-		ECD_04059	0.35	-0.6
4,325,452	-		ECD_04059	0.35	-0.6
4,325,455	+		ECD_04059	0.35	-0.6
4,325,456	-		ECD_04059	0.35	+0.2
4,325,456	-		ECD_04059	0.35	-0.6
4,325,481	+		ECD_04059	0.38	+0.6
4,325,482	-		ECD_04059	0.38	-0.2
4,325,512	-		ECD_04059	0.40	+0.3
4,325,512	-		ECD_04059	0.40	+0.0
4,325,730	-		ECD_04059	0.61	+0.1
4,325,730	-		ECD_04059	0.61	-0.1
4,326,083	-				+0.5
4,326,571	+				+0.1
4,326,590	+				+0.5
4,326,598	-				-0.2
4,326,625	+				+0.4
4,326,637	+				-0.1
4,326,645	+		ECD_04060	0.10	+3.7
4,326,754	+		ECD_04060	0.18	-0.0
4,326,758	+		ECD_04060	0.18	+0.0
4,326,800	+		ECD_04060	0.21	+0.7
4,326,800	+		ECD_04060	0.21	+0.4
4,326,802	+		ECD_04060	0.22	-0.4
4,326,802	+		ECD_04060	0.22	+0.2
4,326,802	+		ECD_04060	0.22	-0.1
4,326,803	-		ECD_04060	0.22	-1.0
4,326,803	-		ECD_04060	0.22	-0.5
4,326,803	-		ECD_04060	0.22	-0.4
4,326,852	-		ECD_04060	0.25	-0.3
4,326,883	+		ECD_04060	0.27	+0.3
4,326,905	-		ECD_04060	0.29	-0.4
4,326,937	+		ECD_04060	0.31	-1.9
4,326,937	+		ECD_04060	0.31	-0.2
4,326,976	+		ECD_04060	0.34	+0.4
4,327,004	+		ECD_04060	0.36	-0.0
4,327,015	+		ECD_04060	0.37	-0.0
4,327,016	-		ECD_04060	0.37	+0.3
4,327,016	-		ECD_04060	0.37	+0.3
4,327,031	+		ECD_04060	0.38	-0.3
4,327,031	+		ECD_04060	0.38	+0.6
4,327,032	-		ECD_04060	0.38	-0.5