Strain Fitness in Escherichia coli BL21 around ECD_03828

Experiment: Mixed culture, Halobacteriovorax-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture, Halobacteriovorax-1
4,041,384	+		ECD_03827	0.25	+0.3
4,041,429	+		ECD_03827	0.30	-0.4
4,041,429	+		ECD_03827	0.30	-1.4
4,041,429	+		ECD_03827	0.30	-1.2
4,041,429	+		ECD_03827	0.30	-0.9
4,041,430	-		ECD_03827	0.30	-0.8
4,041,430	-		ECD_03827	0.30	-1.1
4,041,430	-		ECD_03827	0.30	-1.3
4,041,492	+		ECD_03827	0.37	-1.0
4,041,540	+		ECD_03827	0.42	-1.2
4,041,553	+		ECD_03827	0.44	-1.8
4,041,553	+		ECD_03827	0.44	-0.7
4,041,578	+		ECD_03827	0.47	-3.8
4,041,578	+		ECD_03827	0.47	-0.5
4,041,807	+		ECD_03827	0.72	-0.7
4,041,807	+		ECD_03827	0.72	-0.8
4,041,852	+		ECD_03827	0.77	-1.4
4,041,852	+		ECD_03827	0.77	-2.1
4,041,927	+		ECD_03827	0.86	-0.1
4,041,939	+		ECD_03827	0.87	-1.9
4,041,940	-		ECD_03827	0.87	-1.6
4,041,985	+				-0.6
4,041,986	-				-1.2
4,041,986	-				-0.0
4,041,986	-				-1.5
4,042,051	+				+0.5
4,042,051	+				-0.1
4,042,051	+				-0.7
4,042,051	+				-0.2
4,042,051	+				-0.2
4,042,052	-				-0.5
4,042,055	+				-0.2
4,042,055	+				+0.1
4,042,056	-				+0.7
4,042,056	-				+0.3
4,042,140	-				-0.5
4,042,170	-				-0.0
4,042,170	-				+0.4
4,042,189	-				+0.7
4,042,262	+				-0.1
4,042,282	+				-0.2
4,042,282	+				+0.3
4,042,283	-				-0.1
4,042,283	-				-0.1
4,042,287	-				-0.0
4,042,287	-				+0.1
4,042,323	+				+0.0
4,042,325	+				-0.2
4,042,326	-				+0.3
4,042,336	+				+0.8
4,042,346	+				-0.4
4,042,365	+				+0.7
4,042,519	-				+0.2
4,042,532	-				-0.7
4,042,596	-				+0.5
4,042,667	+		ECD_03828	0.13	-0.2
4,042,791	+		ECD_03828	0.19	-0.4
4,042,792	-		ECD_03828	0.19	+0.6
4,042,792	-		ECD_03828	0.19	+1.1
4,042,792	-		ECD_03828	0.19	-0.0
4,042,792	-		ECD_03828	0.19	+0.0
4,042,792	-		ECD_03828	0.19	-0.7
4,042,792	-		ECD_03828	0.19	-0.1
4,042,792	-		ECD_03828	0.19	+0.2
4,042,838	+		ECD_03828	0.21	-1.1
4,042,838	+		ECD_03828	0.21	-0.6
4,042,839	-		ECD_03828	0.21	-0.4
4,042,870	+		ECD_03828	0.22	+0.1
4,042,912	+		ECD_03828	0.24	-0.6
4,042,912	+		ECD_03828	0.24	-0.1
4,043,113	+		ECD_03828	0.34	-0.1
4,043,183	-		ECD_03828	0.37	+0.2
4,043,191	+		ECD_03828	0.37	-0.2
4,043,265	+		ECD_03828	0.40	+0.2
4,043,265	+		ECD_03828	0.40	+0.3
4,043,282	+		ECD_03828	0.41	-0.4
4,043,283	-		ECD_03828	0.41	+0.8
4,043,283	-		ECD_03828	0.41	-0.4
4,043,311	+		ECD_03828	0.43	+0.0
4,043,312	-		ECD_03828	0.43	+0.4
4,043,364	-		ECD_03828	0.45	+0.1
4,043,387	+		ECD_03828	0.46	+0.5
4,043,387	+		ECD_03828	0.46	+0.9
4,043,387	+		ECD_03828	0.46	+0.1
4,043,387	+		ECD_03828	0.46	-0.7
4,043,388	-		ECD_03828	0.46	-0.8
4,043,388	-		ECD_03828	0.46	+0.2
4,043,488	+		ECD_03828	0.51	-0.0
4,043,645	+		ECD_03828	0.58	-0.2
4,043,708	+		ECD_03828	0.61	+0.0
4,043,809	+		ECD_03828	0.65	+0.4
4,043,944	+		ECD_03828	0.72	+0.3
4,043,945	-		ECD_03828	0.72	+0.2
4,043,967	+		ECD_03828	0.73	-0.2
4,043,967	+		ECD_03828	0.73	-0.0
4,043,967	+		ECD_03828	0.73	+0.0
4,043,967	+		ECD_03828	0.73	+0.4
4,043,967	+		ECD_03828	0.73	-0.0
4,043,968	-		ECD_03828	0.73	-0.1
4,043,968	-		ECD_03828	0.73	+0.1
4,044,030	+		ECD_03828	0.76	+0.3
4,044,030	+		ECD_03828	0.76	+0.1
4,044,030	+		ECD_03828	0.76	-0.2
4,044,126	-		ECD_03828	0.80	-0.0
4,044,292	-		ECD_03828	0.88	-0.3
4,044,292	-		ECD_03828	0.88	-0.1
4,044,439	+				-0.4
4,044,439	+				+0.2
4,044,471	-				-0.1
4,044,471	-				+0.0
4,044,561	-				+0.9
4,044,618	+				-0.3
4,044,618	+				+0.2
4,044,618	+				+0.4
4,044,618	+				-0.5
4,044,619	-				-0.1
4,044,619	-				+0.7
4,044,621	-				+0.0
4,044,715	-				-0.0
4,044,715	-				+0.3
4,044,715	-				+0.7
4,044,725	-				+0.0
4,044,725	-				+0.3
4,044,726	+				-0.3
4,044,726	+				+1.3
4,044,727	-				+0.5
4,044,727	-				+0.2
4,044,727	-				-0.1
4,044,727	-				-0.4
4,044,757	+		ECD_03829	0.11	+0.9
4,044,758	-		ECD_03829	0.11	+0.2
4,044,758	-		ECD_03829	0.11	+0.1
4,044,777	+		ECD_03829	0.13	-0.2
4,044,786	-		ECD_03829	0.14	+0.1
4,044,786	-		ECD_03829	0.14	-0.6
4,044,828	-		ECD_03829	0.19	-0.5
4,044,830	+		ECD_03829	0.19	-0.0
4,044,862	-		ECD_03829	0.23	-0.1
4,044,865	+		ECD_03829	0.23	+0.0
4,044,865	+		ECD_03829	0.23	-0.3
4,044,865	+		ECD_03829	0.23	-0.3
4,044,964	+		ECD_03829	0.34	-0.1
4,044,964	+		ECD_03829	0.34	-0.4
4,044,965	-		ECD_03829	0.34	+0.8
4,044,965	-		ECD_03829	0.34	+0.9
4,044,966	+		ECD_03829	0.34	-0.5
4,044,966	+		ECD_03829	0.34	-0.1
4,044,966	+		ECD_03829	0.34	-0.5
4,044,966	+		ECD_03829	0.34	+0.3
4,044,966	+		ECD_03829	0.34	+0.2
4,044,967	-		ECD_03829	0.34	-0.2
4,044,967	-		ECD_03829	0.34	-0.6
4,044,967	-		ECD_03829	0.34	+0.3
4,044,967	-		ECD_03829	0.34	-0.9
4,044,967	-		ECD_03829	0.34	-0.5
4,045,064	+		ECD_03829	0.45	+0.6
4,045,065	-		ECD_03829	0.45	+0.2
4,045,168	-		ECD_03829	0.57	+0.3
4,045,177	+		ECD_03829	0.58	+0.3
4,045,178	-		ECD_03829	0.58	-0.0
4,045,178	-		ECD_03829	0.58	-0.8
4,045,178	-		ECD_03829	0.58	+0.4
4,045,178	-		ECD_03829	0.58	-0.2
4,045,231	+		ECD_03829	0.64	-0.5
4,045,231	+		ECD_03829	0.64	-0.2
4,045,232	-		ECD_03829	0.64	+0.6
4,045,318	+		ECD_03829	0.73	-0.0
4,045,318	+		ECD_03829	0.73	-0.0
4,045,355	+		ECD_03829	0.77	+0.1
4,045,356	-		ECD_03829	0.77	+1.3
4,045,356	-		ECD_03829	0.77	+1.2
4,045,356	-		ECD_03829	0.77	+0.5
4,045,356	-		ECD_03829	0.77	+0.2
4,045,356	-		ECD_03829	0.77	+0.1
4,045,367	+		ECD_03829	0.79	+0.2
4,045,400	+		ECD_03829	0.82	-0.6
4,045,485	+				-0.0
4,045,486	-				+0.3