Strain Fitness in Escherichia coli BL21 around ECD_03796

Experiment: Mixed culture, Halobacteriovorax-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture, Halobacteriovorax-1
4,009,820	+		ECD_03795	0.21	-0.1
4,009,827	+		ECD_03795	0.22	-0.1
4,009,896	+		ECD_03795	0.29	-0.0
4,009,969	-		ECD_03795	0.36	+0.1
4,010,079	+		ECD_03795	0.47	+0.7
4,010,079	+		ECD_03795	0.47	+0.0
4,010,135	+		ECD_03795	0.53	+0.2
4,010,139	-		ECD_03795	0.54	-0.0
4,010,247	+		ECD_03795	0.65	-0.7
4,010,310	-		ECD_03795	0.71	-0.2
4,010,313	+		ECD_03795	0.71	+0.3
4,010,313	+		ECD_03795	0.71	-0.6
4,010,533	-				-0.2
4,010,544	+				-0.6
4,010,544	+				-0.0
4,010,545	-				-0.5
4,010,545	-				+0.3
4,010,629	+				-0.3
4,010,667	+				+0.3
4,010,668	-				-0.9
4,010,672	-				-0.4
4,010,697	-				+0.3
4,010,701	+				-0.3
4,010,763	+				-0.1
4,010,763	+				-0.3
4,010,764	-				-0.2
4,010,764	-				-0.5
4,010,764	-				-0.7
4,010,764	-				-0.2
4,010,764	-				+0.0
4,010,765	+				+0.2
4,010,765	+				+1.2
4,010,765	+				-0.0
4,010,765	+				+0.2
4,010,766	-				-0.4
4,010,816	-		ECD_03796	0.11	+1.1
4,010,937	-		ECD_03796	0.29	-0.1
4,010,937	-		ECD_03796	0.29	-0.1
4,010,937	-		ECD_03796	0.29	+0.0
4,011,032	-		ECD_03796	0.43	-0.5
4,011,032	-		ECD_03796	0.43	+0.1
4,011,038	+		ECD_03796	0.44	-0.3
4,011,038	+		ECD_03796	0.44	+0.8
4,011,038	+		ECD_03796	0.44	-0.2
4,011,039	-		ECD_03796	0.44	+0.1
4,011,039	-		ECD_03796	0.44	+0.5
4,011,039	-		ECD_03796	0.44	-0.1
4,011,072	+		ECD_03796	0.49	+1.4
4,011,072	+		ECD_03796	0.49	+0.0
4,011,073	-		ECD_03796	0.49	-0.0
4,011,073	-		ECD_03796	0.49	-0.2
4,011,116	+		ECD_03796	0.55	-0.1
4,011,116	+		ECD_03796	0.55	+0.3
4,011,164	-		ECD_03796	0.62	-0.1
4,011,179	+		ECD_03796	0.64	+0.2
4,011,179	+		ECD_03796	0.64	-0.3
4,011,179	+		ECD_03796	0.64	+0.3
4,011,179	+		ECD_03796	0.64	-0.4
4,011,179	+		ECD_03796	0.64	+0.1
4,011,179	+		ECD_03796	0.64	+0.3
4,011,180	-		ECD_03796	0.65	-0.7
4,011,180	-		ECD_03796	0.65	+0.3
4,011,180	-		ECD_03796	0.65	+0.6
4,011,180	-		ECD_03796	0.65	+0.2
4,011,180	-		ECD_03796	0.65	-0.1
4,011,181	+		ECD_03796	0.65	+0.2
4,011,182	-		ECD_03796	0.65	+0.6
4,011,283	+		ECD_03796	0.80	-0.7
4,011,283	+		ECD_03796	0.80	-0.4
4,011,283	+		ECD_03796	0.80	-0.3
4,011,284	-		ECD_03796	0.80	+0.0
4,011,440	-				-0.3
4,011,510	+				-0.2
4,011,511	-				-0.4
4,011,526	-				+0.2
4,011,535	+				+0.8
4,011,536	-				-0.7
4,011,537	+				-0.0
4,011,687	+		ECD_03797	0.12	-2.2
4,011,752	-		ECD_03797	0.17	-2.9
4,011,761	-		ECD_03797	0.17	-3.2
4,011,800	-		ECD_03797	0.20	-2.3
4,012,010	-		ECD_03797	0.35	-1.4
4,012,010	-		ECD_03797	0.35	-2.1
4,012,325	-		ECD_03797	0.58	-2.2