Strain Fitness in Escherichia coli BL21 around ECD_03706

Experiment: Mixed culture, Halobacteriovorax-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture, Halobacteriovorax-1
3,902,947	-		ECD_03704	0.89	-0.3
3,902,947	-		ECD_03704	0.89	-0.7
3,902,947	-		ECD_03704	0.89	+0.3
3,903,024	-				-0.1
3,903,058	-				+0.5
3,903,066	+				-0.2
3,903,067	-				-0.2
3,903,067	-				-0.2
3,903,070	+				+0.3
3,903,071	-				-0.2
3,903,071	-				-0.2
3,903,092	+				+0.5
3,903,104	+				+0.4
3,903,105	-				+1.0
3,903,105	-				-0.1
3,903,120	+				+0.1
3,903,120	+				-0.4
3,903,120	+				+0.5
3,903,121	-				+0.2
3,903,121	-				+0.4
3,903,121	-				+0.1
3,903,240	+		ECD_03705	0.22	-1.3
3,903,240	+		ECD_03705	0.22	+0.3
3,903,241	-		ECD_03705	0.22	+0.0
3,903,247	+		ECD_03705	0.22	-0.1
3,903,248	-		ECD_03705	0.23	-0.1
3,903,255	+		ECD_03705	0.23	+0.5
3,903,255	+		ECD_03705	0.23	-0.1
3,903,255	+		ECD_03705	0.23	+0.2
3,903,256	-		ECD_03705	0.24	-0.4
3,903,256	-		ECD_03705	0.24	-0.1
3,903,256	-		ECD_03705	0.24	+0.0
3,903,372	+		ECD_03705	0.38	-0.3
3,903,372	+		ECD_03705	0.38	-0.7
3,903,372	+		ECD_03705	0.38	+0.8
3,903,373	-		ECD_03705	0.38	+0.1
3,903,375	+		ECD_03705	0.38	-0.5
3,903,375	+		ECD_03705	0.38	-0.4
3,903,375	+		ECD_03705	0.38	+0.6
3,903,376	-		ECD_03705	0.39	+0.2
3,903,403	-		ECD_03705	0.42	-1.1
3,903,457	+		ECD_03705	0.49	+0.8
3,903,466	+		ECD_03705	0.50	+0.2
3,903,466	+		ECD_03705	0.50	-1.3
3,903,467	-		ECD_03705	0.50	-0.5
3,903,467	-		ECD_03705	0.50	-0.9
3,903,694	-		ECD_03705	0.78	-0.1
3,903,694	-		ECD_03705	0.78	-0.0
3,903,850	-				+0.0
3,903,856	+				+0.4
3,903,856	+				-0.6
3,903,856	+				-0.2
3,903,856	+				+0.8
3,903,857	-				+0.1
3,903,857	-				+0.2
3,903,899	+				+0.3
3,903,954	+				+0.4
3,903,954	+				+0.7
3,903,954	+				+0.5
3,903,954	+				-0.3
3,903,955	-				+0.0
3,903,955	-				+0.0
3,903,955	-				+0.1
3,903,988	-				+0.2
3,903,994	+				+0.0
3,904,003	+				+1.3
3,904,027	+				+0.7
3,904,027	+				-0.2
3,904,027	+				+0.2
3,904,028	-				-0.3
3,904,120	+		ECD_03706	0.20	-0.2
3,904,120	+		ECD_03706	0.20	+0.4
3,904,120	+		ECD_03706	0.20	+0.4
3,904,120	+		ECD_03706	0.20	-0.8
3,904,120	+		ECD_03706	0.20	+0.2
3,904,121	-		ECD_03706	0.20	+0.6
3,904,121	-		ECD_03706	0.20	-0.5
3,904,121	-		ECD_03706	0.20	-0.8
3,904,121	-		ECD_03706	0.20	-0.2
3,904,121	-		ECD_03706	0.20	+0.9
3,904,122	+		ECD_03706	0.20	-0.2
3,904,122	+		ECD_03706	0.20	+0.4
3,904,122	+		ECD_03706	0.20	+0.2
3,904,122	+		ECD_03706	0.20	+0.1
3,904,122	+		ECD_03706	0.20	+0.2
3,904,123	-		ECD_03706	0.20	+1.0
3,904,123	-		ECD_03706	0.20	-0.1
3,904,123	-		ECD_03706	0.20	+0.6
3,904,123	-		ECD_03706	0.20	+0.2
3,904,123	-		ECD_03706	0.20	+1.4
3,904,123	-		ECD_03706	0.20	+0.3
3,904,123	-		ECD_03706	0.20	+0.9
3,904,123	-		ECD_03706	0.20	+0.0
3,904,156	+		ECD_03706	0.24	+0.7
3,904,156	+		ECD_03706	0.24	-0.4
3,904,156	+		ECD_03706	0.24	-0.2
3,904,156	+		ECD_03706	0.24	+0.1
3,904,156	+		ECD_03706	0.24	+0.2
3,904,156	+		ECD_03706	0.24	+0.2
3,904,156	+		ECD_03706	0.24	+0.3
3,904,156	+		ECD_03706	0.24	+0.8
3,904,156	+		ECD_03706	0.24	+0.4
3,904,156	+		ECD_03706	0.24	+0.2
3,904,156	+		ECD_03706	0.24	+0.0
3,904,156	+		ECD_03706	0.24	-0.1
3,904,157	-		ECD_03706	0.24	+0.2
3,904,157	-		ECD_03706	0.24	+0.3
3,904,157	-		ECD_03706	0.24	-0.1
3,904,157	-		ECD_03706	0.24	+0.1
3,904,157	-		ECD_03706	0.24	-0.5
3,904,157	-		ECD_03706	0.24	+0.8
3,904,157	-		ECD_03706	0.24	+0.3
3,904,157	-		ECD_03706	0.24	+0.2
3,904,158	+		ECD_03706	0.24	+1.1
3,904,158	+		ECD_03706	0.24	-0.1
3,904,158	+		ECD_03706	0.24	-0.5
3,904,158	+		ECD_03706	0.24	-0.6
3,904,158	+		ECD_03706	0.24	-0.4
3,904,158	+		ECD_03706	0.24	-0.6
3,904,159	-		ECD_03706	0.24	-0.6
3,904,178	-		ECD_03706	0.26	+0.7
3,904,178	-		ECD_03706	0.26	-0.2
3,904,178	-		ECD_03706	0.26	+0.3
3,904,231	+		ECD_03706	0.32	+0.2
3,904,246	+		ECD_03706	0.34	-0.3
3,904,246	+		ECD_03706	0.34	-1.0
3,904,283	-		ECD_03706	0.38	+0.1
3,904,415	-		ECD_03706	0.52	+0.5
3,904,453	-		ECD_03706	0.57	+0.2
3,904,598	-		ECD_03706	0.73	+0.9
3,904,602	+		ECD_03706	0.73	+0.2
3,904,602	+		ECD_03706	0.73	+0.9
3,904,603	-		ECD_03706	0.73	+0.2
3,904,613	-		ECD_03706	0.74	-0.7
3,904,650	+		ECD_03706	0.79	+0.8
3,904,656	+		ECD_03706	0.79	+0.2
3,904,656	+		ECD_03706	0.79	-0.5
3,904,657	-		ECD_03706	0.79	-0.2
3,904,659	+		ECD_03706	0.80	+0.1
3,904,659	+		ECD_03706	0.80	-0.1
3,904,660	-		ECD_03706	0.80	+0.6
3,904,685	+		ECD_03706	0.82	-1.0
3,904,686	-		ECD_03706	0.83	+0.2
3,904,728	+		ECD_03706	0.87	+0.0
3,904,729	-		ECD_03706	0.87	+0.1
3,904,731	+				-0.9
3,904,732	-				+0.3
3,904,773	+				+0.4
3,904,773	+				-0.6
3,904,774	-				+0.2
3,904,853	-		ECD_03707	0.13	-1.3
3,904,890	+		ECD_03707	0.17	-0.3
3,905,018	+		ECD_03707	0.30	-0.0
3,905,018	+		ECD_03707	0.30	-1.3
3,905,147	-		ECD_03707	0.44	-0.9
3,905,203	-		ECD_03707	0.50	-0.9
3,905,245	+		ECD_03707	0.54	-0.6
3,905,245	+		ECD_03707	0.54	-0.7
3,905,245	+		ECD_03707	0.54	-2.8
3,905,245	+		ECD_03707	0.54	-1.4
3,905,360	+		ECD_03707	0.66	-0.9
3,905,383	+		ECD_03707	0.68	+0.0
3,905,389	+		ECD_03707	0.69	-1.1
3,905,389	+		ECD_03707	0.69	-0.6
3,905,389	+		ECD_03707	0.69	-1.6
3,905,389	+		ECD_03707	0.69	-0.7
3,905,389	+		ECD_03707	0.69	-2.4
3,905,390	-		ECD_03707	0.69	-0.9
3,905,390	-		ECD_03707	0.69	-0.5
3,905,390	-		ECD_03707	0.69	-0.7
3,905,399	+		ECD_03707	0.70	-0.8
3,905,400	-		ECD_03707	0.70	-0.8
3,905,509	+		ECD_03707	0.82	-0.5
3,905,509	+		ECD_03707	0.82	+0.6
3,905,541	-		ECD_03707	0.85	-0.9
3,905,541	-		ECD_03707	0.85	+0.3
3,905,572	+		ECD_03707	0.88	-1.1
3,905,573	-		ECD_03707	0.88	-0.5
3,905,672	+				-1.8
3,905,672	+				-1.8
3,905,673	-				-1.3
3,905,708	+				-1.1
3,905,726	+				-1.8
3,905,727	-				-1.8
3,905,728	+				-0.6
3,905,728	+				-0.3
3,905,728	+				+0.1
3,905,728	+				-0.7
3,905,729	-				-0.8
3,905,729	-				-1.0
3,905,729	-				-1.1
3,905,729	-				-0.0
3,905,793	+				+0.2
3,905,830	+				+0.3
3,905,831	-				-1.6
3,905,831	-				-1.3
3,905,839	-				-1.2