Experiment: Mixed culture, Halobacteriovorax-1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03694 and ECD_03695 are separated by 152 nucleotides ECD_03695 and ECD_03696 are separated by 40 nucleotides ECD_03696 and ECD_03697 are separated by 13 nucleotides ECD_03697 and ECD_03698 are separated by 268 nucleotides
ECD_03694: ECD_03694 - hypothetical protein, at 3,894,076 to 3,894,924
_03694
ECD_03695: ECD_03695 - Magnesium and cobalt transport protein corA, at 3,895,077 to 3,895,253
_03695
ECD_03696: ECD_03696 - DUF2628 family putative inner membrane protein, at 3,895,294 to 3,895,674
_03696
ECD_03697: ECD_03697 - PRK11371 family inner membrane protein, at 3,895,688 to 3,895,894
_03697
ECD_03698: ECD_03698 - putative chloramphenical resistance permease, at 3,896,163 to 3,897,053
_03698
Position (kb)
3895
3896 Strain fitness (log2 ratio)
-1
0
1 at 3894.852 kb on - strand at 3894.944 kb on - strand at 3895.129 kb on - strand, within ECD_03695 at 3895.447 kb on - strand, within ECD_03696 at 3895.820 kb on - strand, within ECD_03697 at 3895.822 kb on - strand, within ECD_03697 at 3895.932 kb on - strand at 3896.086 kb on - strand at 3896.177 kb on + strand at 3896.186 kb on + strand at 3896.249 kb on + strand at 3896.272 kb on + strand, within ECD_03698 at 3896.328 kb on + strand, within ECD_03698 at 3896.329 kb on - strand, within ECD_03698 at 3896.477 kb on - strand, within ECD_03698 at 3896.477 kb on - strand, within ECD_03698 at 3896.514 kb on + strand, within ECD_03698 at 3896.515 kb on - strand, within ECD_03698 at 3896.563 kb on + strand, within ECD_03698 at 3896.564 kb on - strand, within ECD_03698 at 3896.564 kb on - strand, within ECD_03698 at 3896.564 kb on - strand, within ECD_03698 at 3896.600 kb on + strand, within ECD_03698 at 3896.601 kb on - strand, within ECD_03698 at 3896.601 kb on - strand, within ECD_03698 at 3896.604 kb on + strand, within ECD_03698 at 3896.605 kb on - strand, within ECD_03698 at 3896.605 kb on - strand, within ECD_03698 at 3896.605 kb on - strand, within ECD_03698 at 3896.605 kb on - strand, within ECD_03698 at 3896.605 kb on - strand, within ECD_03698
Per-strain Table
Position Strand Gene LocusTag Fraction Mixed culture, Halobacteriovorax-1 remove 3,894,852 - +0.6 3,894,944 - +0.4 3,895,129 - ECD_03695 0.29 +0.0 3,895,447 - ECD_03696 0.40 +0.9 3,895,820 - ECD_03697 0.64 +0.3 3,895,822 - ECD_03697 0.65 +0.0 3,895,932 - +0.8 3,896,086 - +0.4 3,896,177 + +0.6 3,896,186 + +0.0 3,896,249 + +0.6 3,896,272 + ECD_03698 0.12 -0.6 3,896,328 + ECD_03698 0.19 +0.3 3,896,329 - ECD_03698 0.19 +0.3 3,896,477 - ECD_03698 0.35 +0.2 3,896,477 - ECD_03698 0.35 -0.1 3,896,514 + ECD_03698 0.39 +0.3 3,896,515 - ECD_03698 0.40 -0.1 3,896,563 + ECD_03698 0.45 -0.1 3,896,564 - ECD_03698 0.45 -0.2 3,896,564 - ECD_03698 0.45 +0.4 3,896,564 - ECD_03698 0.45 -0.1 3,896,600 + ECD_03698 0.49 -0.1 3,896,601 - ECD_03698 0.49 +0.3 3,896,601 - ECD_03698 0.49 -0.3 3,896,604 + ECD_03698 0.49 -0.5 3,896,605 - ECD_03698 0.50 +0.4 3,896,605 - ECD_03698 0.50 +0.2 3,896,605 - ECD_03698 0.50 +0.4 3,896,605 - ECD_03698 0.50 +0.3 3,896,605 - ECD_03698 0.50 +0.3
Or see this region's nucleotide sequence