Strain Fitness in Escherichia coli BL21 around ECD_03642

Experiment: Mixed culture, Halobacteriovorax-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture, Halobacteriovorax-1
3,837,316	+				+0.6
3,837,341	+				+0.1
3,837,366	+				+0.1
3,837,367	-				+0.0
3,837,367	-				+0.6
3,837,369	+				-0.5
3,837,370	-				+0.4
3,837,372	+				-0.1
3,837,372	+				+0.8
3,837,373	-				+0.2
3,837,373	-				-0.2
3,837,392	-				+0.8
3,837,450	+				-0.2
3,837,542	-		ECD_03642	0.21	-0.2
3,837,663	+		ECD_03642	0.35	-0.4
3,837,664	-		ECD_03642	0.35	-0.7
3,837,664	-		ECD_03642	0.35	-1.1
3,837,668	-		ECD_03642	0.36	-0.6
3,837,681	-		ECD_03642	0.37	-1.1
3,837,700	+		ECD_03642	0.40	-0.1
3,837,700	+		ECD_03642	0.40	-0.8
3,837,700	+		ECD_03642	0.40	-1.3
3,837,701	-		ECD_03642	0.40	-0.5
3,837,701	-		ECD_03642	0.40	-0.2
3,837,710	+		ECD_03642	0.41	-0.4
3,837,739	+		ECD_03642	0.44	-0.9
3,837,740	-		ECD_03642	0.44	-2.4
3,837,769	+		ECD_03642	0.48	-0.9
3,837,772	+		ECD_03642	0.48	-1.0
3,837,772	+		ECD_03642	0.48	-1.1
3,837,772	+		ECD_03642	0.48	-0.6
3,837,772	+		ECD_03642	0.48	-1.2
3,837,772	+		ECD_03642	0.48	-0.6
3,837,772	+		ECD_03642	0.48	-1.0
3,837,772	+		ECD_03642	0.48	-0.4
3,837,772	+		ECD_03642	0.48	-0.3
3,837,772	+		ECD_03642	0.48	-0.6
3,837,773	-		ECD_03642	0.48	-1.3
3,837,773	-		ECD_03642	0.48	-0.1
3,837,773	-		ECD_03642	0.48	-1.2
3,837,773	-		ECD_03642	0.48	-1.6
3,837,845	+		ECD_03642	0.57	-1.3
3,837,846	-		ECD_03642	0.57	-0.6
3,837,846	-		ECD_03642	0.57	-0.2
3,837,853	+		ECD_03642	0.58	-2.2
3,837,874	-		ECD_03642	0.60	-0.6
3,837,895	+		ECD_03642	0.63	-2.0
3,837,895	+		ECD_03642	0.63	-0.4
3,837,896	-		ECD_03642	0.63	-0.8
3,837,901	+		ECD_03642	0.63	-1.7
3,837,901	+		ECD_03642	0.63	-2.3
3,837,901	+		ECD_03642	0.63	-0.3
3,837,901	+		ECD_03642	0.63	-0.7
3,837,902	-		ECD_03642	0.64	-0.6
3,837,902	-		ECD_03642	0.64	-0.4
3,837,902	-		ECD_03642	0.64	-0.9
3,837,902	-		ECD_03642	0.64	-1.1
3,837,902	-		ECD_03642	0.64	-0.9
3,837,943	+		ECD_03642	0.68	-0.6
3,837,944	-		ECD_03642	0.69	+0.0
3,837,955	+		ECD_03642	0.70	-0.9
3,837,955	+		ECD_03642	0.70	-0.5
3,837,956	-		ECD_03642	0.70	-1.8
3,838,008	+		ECD_03642	0.76	-0.9
3,838,132	-				-0.6
3,838,132	-				-0.8
3,838,276	+				-3.4
3,838,276	+				-0.9
3,838,295	+				-1.3
3,838,295	+				-0.6
3,838,296	-				-0.6
3,838,296	-				-0.4
3,838,340	+				-0.3
3,838,341	-				-0.2
3,838,357	-				-0.1
3,838,368	-		ECD_03643	0.12	-0.5
3,838,443	+		ECD_03643	0.35	-1.1
3,838,513	+		ECD_03643	0.55	-0.6
3,838,514	-		ECD_03643	0.55	-0.6
3,838,566	+		ECD_03643	0.71	-0.8
3,838,566	+		ECD_03643	0.71	-0.6
3,838,566	+		ECD_03643	0.71	-1.0
3,838,566	+		ECD_03643	0.71	-1.5
3,838,566	+		ECD_03643	0.71	-0.7
3,838,567	-		ECD_03643	0.71	+0.5
3,838,567	-		ECD_03643	0.71	-1.3
3,838,567	-		ECD_03643	0.71	-0.7
3,838,567	-		ECD_03643	0.71	-0.0
3,838,568	+		ECD_03643	0.71	-0.6
3,838,568	+		ECD_03643	0.71	-0.9
3,838,568	+		ECD_03643	0.71	-0.1
3,838,568	+		ECD_03643	0.71	-1.3
3,838,569	-		ECD_03643	0.72	-1.2
3,838,578	-		ECD_03643	0.74	-0.8
3,838,578	-		ECD_03643	0.74	-0.2
3,838,581	-		ECD_03643	0.75	-0.7
3,838,644	+				-0.6
3,838,666	-				-0.9
3,838,699	-				+0.0
3,838,742	+				+0.6
3,838,742	+				+0.8
3,838,742	+				+0.2
3,838,743	-				+0.3
3,838,773	-				-0.2
3,838,790	+				+0.4
3,838,791	-				-0.3
3,838,912	-		ECD_03644	0.15	+0.0
3,838,923	-		ECD_03644	0.15	-0.1
3,838,956	-		ECD_03644	0.18	-0.5
3,838,980	+		ECD_03644	0.19	+0.0
3,838,992	-		ECD_03644	0.20	-0.7
3,839,019	+		ECD_03644	0.22	-0.4
3,839,115	+		ECD_03644	0.28	-0.0
3,839,115	+		ECD_03644	0.28	+0.6
3,839,115	+		ECD_03644	0.28	+0.2
3,839,115	+		ECD_03644	0.28	-0.1
3,839,116	-		ECD_03644	0.28	-0.1
3,839,116	-		ECD_03644	0.28	-0.4
3,839,116	-		ECD_03644	0.28	-0.2
3,839,155	+		ECD_03644	0.31	-0.2
3,839,155	+		ECD_03644	0.31	-0.1