Strain Fitness in Escherichia coli BL21 around ECD_03552

Experiment: Mixed culture, Halobacteriovorax-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture, Halobacteriovorax-1
3,736,163	+		ECD_03551	0.37	+1.3
3,736,163	+		ECD_03551	0.37	+0.1
3,736,164	-		ECD_03551	0.37	+0.1
3,736,164	-		ECD_03551	0.37	-0.6
3,736,165	+		ECD_03551	0.37	+0.0
3,736,165	+		ECD_03551	0.37	-0.1
3,736,165	+		ECD_03551	0.37	-0.1
3,736,166	-		ECD_03551	0.37	-0.4
3,736,166	-		ECD_03551	0.37	-0.6
3,736,166	-		ECD_03551	0.37	-1.2
3,736,166	-		ECD_03551	0.37	-0.5
3,736,166	-		ECD_03551	0.37	+0.1
3,736,204	+		ECD_03551	0.40	+0.2
3,736,204	+		ECD_03551	0.40	+0.0
3,736,204	+		ECD_03551	0.40	-0.6
3,736,205	-		ECD_03551	0.40	+0.1
3,736,205	-		ECD_03551	0.40	+0.8
3,736,205	-		ECD_03551	0.40	+0.2
3,736,205	-		ECD_03551	0.40	+0.1
3,736,205	-		ECD_03551	0.40	+0.2
3,736,205	-		ECD_03551	0.40	+0.2
3,736,205	-		ECD_03551	0.40	+0.9
3,736,216	+		ECD_03551	0.41	+0.0
3,736,216	+		ECD_03551	0.41	+0.1
3,736,216	+		ECD_03551	0.41	-0.3
3,736,216	+		ECD_03551	0.41	+0.3
3,736,216	+		ECD_03551	0.41	+0.1
3,736,216	+		ECD_03551	0.41	+0.2
3,736,217	-		ECD_03551	0.41	-0.6
3,736,217	-		ECD_03551	0.41	-0.3
3,736,217	-		ECD_03551	0.41	-0.2
3,736,217	-		ECD_03551	0.41	+0.2
3,736,239	-		ECD_03551	0.43	-1.2
3,736,239	-		ECD_03551	0.43	+0.4
3,736,239	-		ECD_03551	0.43	+0.3
3,736,240	+		ECD_03551	0.43	+0.2
3,736,240	+		ECD_03551	0.43	-0.1
3,736,258	+		ECD_03551	0.44	-0.0
3,736,259	-		ECD_03551	0.44	+0.0
3,736,259	-		ECD_03551	0.44	+0.7
3,736,259	-		ECD_03551	0.44	+0.8
3,736,259	-		ECD_03551	0.44	+0.2
3,736,451	-		ECD_03551	0.59	-0.4
3,736,455	+		ECD_03551	0.59	+0.7
3,736,455	+		ECD_03551	0.59	-0.5
3,736,456	-		ECD_03551	0.59	+0.3
3,736,456	-		ECD_03551	0.59	-0.5
3,736,519	-		ECD_03551	0.64	-0.1
3,736,552	+		ECD_03551	0.67	+0.1
3,736,671	-		ECD_03551	0.76	+0.0
3,736,759	+		ECD_03551	0.82	+0.1
3,736,759	+		ECD_03551	0.82	-0.1
3,736,759	+		ECD_03551	0.82	-0.5
3,736,760	-		ECD_03551	0.82	+0.2
3,736,760	-		ECD_03551	0.82	+0.6
3,736,760	-		ECD_03551	0.82	-0.5
3,736,760	-		ECD_03551	0.82	+1.1
3,736,760	-		ECD_03551	0.82	+0.0
3,736,760	-		ECD_03551	0.82	-2.2
3,736,763	+		ECD_03551	0.83	-0.1
3,736,763	+		ECD_03551	0.83	-0.0
3,736,763	+		ECD_03551	0.83	+0.2
3,736,768	+		ECD_03551	0.83	-0.1
3,736,768	+		ECD_03551	0.83	+0.5
3,736,768	+		ECD_03551	0.83	-0.2
3,736,769	-		ECD_03551	0.83	-0.2
3,736,769	-		ECD_03551	0.83	+0.1
3,736,865	-				+0.2
3,736,877	-				-0.3
3,736,943	+				+0.2
3,736,943	+				-0.2
3,736,944	-				-0.4
3,737,003	-				+0.6
3,737,008	+				-0.5
3,737,008	+				+1.1
3,737,009	-				-0.1
3,737,009	-				-0.1
3,737,009	-				+0.3
3,737,019	+				-0.4
3,737,061	+				+0.1
3,737,159	+		ECD_03552	0.11	+0.0
3,737,327	+		ECD_03552	0.22	+0.5
3,737,409	+		ECD_03552	0.27	-0.0
3,737,454	+		ECD_03552	0.30	+0.3
3,737,454	+		ECD_03552	0.30	+0.6
3,737,455	-		ECD_03552	0.30	+0.3
3,737,531	+		ECD_03552	0.35	+0.4
3,737,538	-		ECD_03552	0.36	+0.6
3,737,538	-		ECD_03552	0.36	+0.4
3,737,666	+		ECD_03552	0.44	+0.5
3,737,666	+		ECD_03552	0.44	-0.3
3,737,667	-		ECD_03552	0.44	+0.0
3,737,667	-		ECD_03552	0.44	+0.3
3,737,667	-		ECD_03552	0.44	+0.7
3,737,739	+		ECD_03552	0.49	-1.5
3,737,740	-		ECD_03552	0.49	-0.9
3,737,828	-		ECD_03552	0.55	-0.2
3,737,828	-		ECD_03552	0.55	+0.9
3,737,939	-		ECD_03552	0.62	-0.6
3,738,012	-		ECD_03552	0.67	+0.4
3,738,022	+		ECD_03552	0.68	-0.6
3,738,023	-		ECD_03552	0.68	-0.1
3,738,042	+		ECD_03552	0.69	-0.0
3,738,043	-		ECD_03552	0.69	-0.4
3,738,069	+		ECD_03552	0.71	+0.6
3,738,236	+		ECD_03552	0.82	+0.7
3,738,289	+		ECD_03552	0.86	+0.2
3,738,290	-		ECD_03552	0.86	-0.7
3,738,423	-				-0.1
3,738,456	-				+0.0
3,738,456	-				+0.1
3,738,480	+				+0.5
3,738,480	+				-0.5
3,738,480	+				-0.2
3,738,481	-				+0.9
3,738,481	-				-0.1
3,738,481	-				-0.4
3,738,481	-				-0.3
3,738,709	+		ECD_03553	0.35	-0.3
3,738,733	-		ECD_03553	0.39	+0.2
3,738,784	+		ECD_03553	0.48	-0.4
3,738,785	-		ECD_03553	0.48	-0.3
3,738,865	+		ECD_03553	0.61	+0.8
3,738,865	+		ECD_03553	0.61	+0.2
3,738,878	-		ECD_03553	0.63	+0.2
3,738,897	-		ECD_03553	0.67	-0.3
3,738,916	+		ECD_03553	0.70	+0.3
3,738,940	+		ECD_03553	0.74	+0.3
3,738,941	-		ECD_03553	0.74	+0.7
3,738,941	-		ECD_03553	0.74	+0.6
3,739,007	+		ECD_03553	0.85	-0.3
3,739,008	-		ECD_03553	0.85	+0.3
3,739,008	-		ECD_03553	0.85	-0.4
3,739,008	-		ECD_03553	0.85	-0.0
3,739,073	+				-0.8
3,739,073	+				+0.4
3,739,074	-				+0.1
3,739,074	-				-0.1
3,739,074	-				+0.3
3,739,128	-				+0.1
3,739,194	+				+0.3
3,739,194	+				-0.5
3,739,219	-		ECD_03554	0.18	+0.5
3,739,219	-		ECD_03554	0.18	-0.6
3,739,261	+		ECD_03554	0.32	-0.3
3,739,262	-		ECD_03554	0.32	+0.0
3,739,262	-		ECD_03554	0.32	-0.2
3,739,262	-		ECD_03554	0.32	+0.1
3,739,305	+		ECD_03554	0.47	+0.3
3,739,306	-		ECD_03554	0.47	-0.4
3,739,396	+		ECD_03554	0.78	-0.6
3,739,432	+				-0.4
3,739,433	-				+0.1
3,739,463	+				+0.1