Strain Fitness in Escherichia coli BL21 around ECD_03525

Experiment: Mixed culture, Halobacteriovorax-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture, Halobacteriovorax-1
3,713,927	+		ECD_03523	0.50	+0.1
3,713,927	+		ECD_03523	0.50	+1.1
3,713,927	+		ECD_03523	0.50	+0.5
3,713,927	+		ECD_03523	0.50	+0.0
3,713,928	-		ECD_03523	0.50	-0.1
3,713,928	-		ECD_03523	0.50	+0.1
3,713,928	-		ECD_03523	0.50	-0.6
3,713,928	-		ECD_03523	0.50	-0.9
3,713,928	-		ECD_03523	0.50	-0.2
3,713,928	-		ECD_03523	0.50	-0.0
3,713,928	-		ECD_03523	0.50	-0.2
3,713,928	-		ECD_03523	0.50	+0.6
3,713,928	-		ECD_03523	0.50	-0.1
3,713,928	-		ECD_03523	0.50	-0.1
3,713,929	+		ECD_03523	0.50	+0.5
3,713,929	+		ECD_03523	0.50	-0.0
3,713,930	-		ECD_03523	0.50	+0.3
3,714,130	+		ECD_03523	0.67	+0.8
3,714,131	-		ECD_03523	0.68	-0.9
3,714,131	-		ECD_03523	0.68	+0.3
3,714,131	-		ECD_03523	0.68	+0.0
3,714,134	+		ECD_03523	0.68	+0.0
3,714,134	+		ECD_03523	0.68	+0.4
3,714,134	+		ECD_03523	0.68	+0.5
3,714,134	+		ECD_03523	0.68	-0.1
3,714,134	+		ECD_03523	0.68	-0.0
3,714,135	-		ECD_03523	0.68	+0.4
3,714,186	-		ECD_03523	0.72	-1.2
3,714,186	-		ECD_03523	0.72	+0.0
3,714,406	+				-0.2
3,714,407	-				-0.4
3,714,409	+				+0.3
3,714,414	+				+0.7
3,714,415	-				+0.0
3,714,415	-				+0.0
3,714,415	-				-0.7
3,714,415	-				-0.0
3,714,415	-				+0.3
3,714,480	+				+0.0
3,714,480	+				+0.3
3,714,480	+				-0.2
3,714,480	+				+0.6
3,714,481	-				-0.4
3,714,481	-				-0.7
3,714,481	-				+0.4
3,714,481	-				-0.2
3,714,598	-		ECD_03524	0.70	+0.0
3,714,607	+		ECD_03524	0.72	+1.1
3,714,607	+		ECD_03524	0.72	+0.1
3,714,608	-		ECD_03524	0.73	+0.2
3,714,608	-		ECD_03524	0.73	+0.0
3,714,608	-		ECD_03524	0.73	+0.1
3,714,646	-		ECD_03524	0.84	-0.4
3,714,667	+		ECD_03524	0.90	-0.3
3,714,735	+				+0.2
3,714,740	+				+0.6
3,714,800	+				+0.1
3,714,846	+				+0.8
3,714,846	+				-1.1
3,714,891	-		ECD_03525	0.21	-0.1
3,714,897	-		ECD_03525	0.23	+0.3
3,714,963	+		ECD_03525	0.42	-0.3
3,714,965	+		ECD_03525	0.43	-0.2
3,714,974	+		ECD_03525	0.46	+0.3
3,714,994	+		ECD_03525	0.52	+0.9
3,714,994	+		ECD_03525	0.52	+0.6
3,715,045	+		ECD_03525	0.67	-0.3
3,715,057	+		ECD_03525	0.70	-0.6
3,715,057	+		ECD_03525	0.70	-0.4
3,715,057	+		ECD_03525	0.70	+0.0
3,715,058	-		ECD_03525	0.71	+0.3
3,715,058	-		ECD_03525	0.71	-1.0
3,715,060	+		ECD_03525	0.71	-0.1
3,715,060	+		ECD_03525	0.71	-0.6
3,715,060	+		ECD_03525	0.71	+0.4
3,715,061	-		ECD_03525	0.71	-2.0
3,715,061	-		ECD_03525	0.71	-0.9
3,715,153	+				+0.6
3,715,153	+				+0.5
3,715,153	+				+0.3
3,715,154	-				-0.5
3,715,154	-				+0.0
3,715,257	-				+0.4
3,715,260	-		ECD_03526	0.12	-1.7
3,715,260	-		ECD_03526	0.12	+0.4
3,715,357	+		ECD_03526	0.74	+0.3
3,715,358	-		ECD_03526	0.74	-0.0
3,715,358	-		ECD_03526	0.74	+0.3
3,715,380	-		ECD_03526	0.88	+0.1
3,715,380	-		ECD_03526	0.88	+0.0
3,715,419	+				+0.0
3,715,420	-				+0.3
3,715,420	-				-0.4
3,715,420	-				+0.1
3,715,421	+				+0.6
3,715,421	+				-0.2
3,715,422	-				-0.4
3,715,423	+				+0.9
3,715,424	-				-0.1
3,715,424	-				+0.2
3,715,429	+				+0.8
3,715,429	+				-0.1
3,715,430	-				+0.3
3,715,430	-				+0.5
3,715,430	-				-0.9
3,715,437	-				+0.0
3,715,437	-				+0.7
3,715,439	+				+0.0
3,715,440	-				+0.5
3,715,440	-				+0.1
3,715,444	-				+0.4
3,715,444	-				+0.1
3,715,445	+				+0.5
3,715,445	+				-0.2
3,715,446	-				-0.0
3,715,446	-				-0.0
3,715,458	+				+0.3
3,715,458	+				+0.6
3,715,459	-				-0.5
3,715,459	-				+0.1
3,715,459	-				+0.0
3,715,459	-				-0.0
3,715,470	+				-0.2
3,715,475	+				+0.3
3,715,476	-				-0.0
3,715,476	-				+0.4
3,715,478	+				-0.1
3,715,478	+				+0.8
3,715,478	+				-0.1
3,715,479	-				-1.0
3,715,479	-				+0.1
3,715,479	-				+0.6
3,715,479	-				+0.8
3,715,479	-				+0.2
3,715,479	-				-0.4
3,715,479	-				+0.3
3,715,498	-				+0.1
3,715,498	-				-0.2
3,715,498	-				+0.5
3,715,508	+				+0.3
3,715,508	+				+0.2
3,715,508	+				+2.0
3,715,551	+				+0.1
3,715,551	+				+0.3
3,715,555	+				-2.1
3,715,556	-		ECD_03527	0.10	-0.7
3,715,560	+		ECD_03527	0.12	+0.2
3,715,560	+		ECD_03527	0.12	+0.2
3,715,641	+		ECD_03527	0.38	+0.6
3,715,647	+		ECD_03527	0.40	+0.0
3,715,648	-		ECD_03527	0.41	+0.5
3,715,648	-		ECD_03527	0.41	+0.1
3,715,648	-		ECD_03527	0.41	+0.7
3,715,648	-		ECD_03527	0.41	+0.3
3,715,648	-		ECD_03527	0.41	+0.2
3,715,714	+		ECD_03527	0.62	-0.1
3,715,715	-		ECD_03527	0.63	+0.3
3,715,718	+		ECD_03527	0.64	+0.3
3,715,719	-		ECD_03527	0.64	+0.0
3,715,719	-		ECD_03527	0.64	+0.0
3,715,749	+		ECD_03527	0.74	+0.5
3,715,750	-		ECD_03527	0.74	+0.3
3,715,785	-		ECD_03527	0.86	+0.6
3,715,791	-		ECD_03527	0.88	+0.6
3,715,804	-				+1.2
3,715,816	-				+0.2
3,715,826	-				+0.1
3,715,831	+				+0.0
3,715,832	-				+0.4
3,715,832	-				+0.1
3,715,832	-				-0.3
3,715,832	-				-0.2
3,715,907	-				+0.3
3,715,942	+				-0.0
3,715,948	+				-0.3
3,716,017	+				+0.4
3,716,018	-				-0.5
3,716,049	-				+0.1
3,716,119	+				+0.0
3,716,120	-				-0.1
3,716,125	+				+0.1
3,716,125	+				+1.6