Strain Fitness in Escherichia coli BL21 around ECD_03501

Experiment: Mixed culture, Halobacteriovorax-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture, Halobacteriovorax-1
3,682,584	+				-0.2
3,682,585	-				-0.2
3,682,655	-				+0.3
3,682,655	-				-0.3
3,682,700	-		ECD_03500	0.11	-1.1
3,682,775	-		ECD_03500	0.21	-0.2
3,682,775	-		ECD_03500	0.21	-0.6
3,682,811	+		ECD_03500	0.26	-0.1
3,682,812	-		ECD_03500	0.26	+0.1
3,682,841	-		ECD_03500	0.30	-0.1
3,682,841	-		ECD_03500	0.30	+0.5
3,683,097	+		ECD_03500	0.66	-0.1
3,683,133	+		ECD_03500	0.71	-1.1
3,683,134	-		ECD_03500	0.71	+0.0
3,683,215	-		ECD_03500	0.82	-0.4
3,683,224	-		ECD_03500	0.84	+0.8
3,683,280	+				-0.5
3,683,280	+				-1.3
3,683,280	+				-0.1
3,683,281	-				+0.0
3,683,281	-				-1.1
3,683,283	-				+0.3
3,683,286	+				-1.2
3,683,286	+				-0.5
3,683,287	-				+0.4
3,683,379	+				-0.3
3,683,380	-				+0.0
3,683,381	+				-1.0
3,683,382	-				+0.1
3,683,399	-				+0.3
3,683,405	-				-0.1
3,683,450	+				-0.1
3,683,450	+				-0.2
3,683,450	+				-0.2
3,683,466	+				-0.2
3,683,466	+				-0.1
3,683,466	+				+0.3
3,683,466	+				-0.1
3,683,467	-				+0.3
3,683,557	+		ECD_03501	0.10	+0.8
3,683,569	+		ECD_03501	0.12	-0.4
3,683,569	+		ECD_03501	0.12	-0.9
3,683,569	+		ECD_03501	0.12	-0.1
3,683,570	-		ECD_03501	0.12	-0.1
3,683,622	+		ECD_03501	0.18	-0.3
3,683,733	-		ECD_03501	0.31	-0.1
3,683,874	+		ECD_03501	0.47	-0.0
3,683,889	+		ECD_03501	0.49	+1.4
3,683,889	+		ECD_03501	0.49	+0.0
3,683,890	-		ECD_03501	0.49	-0.4
3,683,890	-		ECD_03501	0.49	-0.1
3,684,151	+		ECD_03501	0.79	-0.2
3,684,152	-		ECD_03501	0.79	+0.1
3,684,198	+		ECD_03501	0.85	+0.2
3,684,198	+		ECD_03501	0.85	+0.1
3,684,198	+		ECD_03501	0.85	-0.2
3,684,199	-		ECD_03501	0.85	-0.3
3,684,199	-		ECD_03501	0.85	+0.9
3,684,322	-				+0.1
3,684,328	+				-0.1
3,684,335	+				+0.4
3,684,341	+				+0.0
3,684,493	+				+1.2
3,684,494	-				+0.1
3,684,494	-				+0.3
3,684,497	+				-0.2
3,684,498	-				+0.4
3,684,498	-				+1.0
3,684,507	+				+0.0
3,684,515	+				+0.3
3,684,590	+				+0.3
3,684,623	-				+0.8
3,684,756	+		ECD_03502	0.25	+0.1
3,684,757	-		ECD_03502	0.25	-0.0
3,684,760	-		ECD_03502	0.25	-0.0
3,684,760	-		ECD_03502	0.25	+0.1
3,684,760	-		ECD_03502	0.25	+0.1
3,684,807	-		ECD_03502	0.31	+0.4
3,684,822	+		ECD_03502	0.33	-0.2
3,684,825	+		ECD_03502	0.33	+0.1
3,684,826	-		ECD_03502	0.33	+0.1
3,684,873	-		ECD_03502	0.39	+0.0
3,684,979	+		ECD_03502	0.52	-0.4
3,685,041	+		ECD_03502	0.59	+0.1
3,685,070	+		ECD_03502	0.63	+0.1
3,685,070	+		ECD_03502	0.63	+0.1
3,685,081	-		ECD_03502	0.64	+0.7
3,685,093	+		ECD_03502	0.66	+0.4
3,685,093	+		ECD_03502	0.66	-0.2
3,685,142	-		ECD_03502	0.72	+0.9
3,685,181	-		ECD_03502	0.76	+0.6