Strain Fitness in Escherichia coli BL21 around ECD_03405

Experiment: Mixed culture, Halobacteriovorax-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture, Halobacteriovorax-1
3,580,632	-		ECD_03404	0.20	+0.3
3,580,648	+		ECD_03404	0.23	-0.2
3,580,648	+		ECD_03404	0.23	-0.7
3,580,648	+		ECD_03404	0.23	+0.6
3,580,649	-		ECD_03404	0.23	-0.1
3,580,649	-		ECD_03404	0.23	+0.1
3,580,649	-		ECD_03404	0.23	+0.4
3,580,649	-		ECD_03404	0.23	-0.4
3,580,649	-		ECD_03404	0.23	+0.5
3,580,888	+		ECD_03404	0.56	-1.3
3,580,888	+		ECD_03404	0.56	+0.2
3,580,889	-		ECD_03404	0.56	-0.5
3,580,923	+		ECD_03404	0.61	-0.0
3,580,924	-		ECD_03404	0.61	+0.3
3,580,924	-		ECD_03404	0.61	-0.0
3,580,973	-		ECD_03404	0.68	+0.4
3,580,973	-		ECD_03404	0.68	+0.2
3,580,979	-		ECD_03404	0.69	+0.0
3,581,044	-		ECD_03404	0.78	+0.0
3,581,070	-		ECD_03404	0.82	+0.1
3,581,070	-		ECD_03404	0.82	-0.1
3,581,070	-		ECD_03404	0.82	+0.3
3,581,140	-				-0.1
3,581,140	-				-0.1
3,581,140	-				-0.0
3,581,140	-				-0.5
3,581,140	-				+0.9
3,581,146	-				+0.1
3,581,263	-				+0.6
3,581,263	-				+0.7
3,581,295	-				+1.0
3,581,295	-				-0.0
3,581,295	-				+0.2
3,581,295	-				-0.3
3,581,298	+				-0.1
3,581,299	-				-0.2
3,581,299	-				+0.6
3,581,299	-				-0.0
3,581,338	+				-0.6
3,581,357	+				-0.7
3,581,450	+				+0.5
3,581,450	+				-0.0
3,581,457	+				-1.5
3,581,457	+				-0.6
3,581,458	-				-0.3
3,581,458	-				+0.8
3,581,459	+				+0.2
3,581,459	+				-0.5
3,581,459	+				-0.3
3,581,460	-				+0.0
3,581,469	+				+0.3
3,581,480	+				-0.1
3,581,488	+				-0.0
3,581,489	-				-0.1
3,581,490	+				+0.3
3,581,491	-				+0.4
3,581,500	+				-0.1
3,581,500	+				-0.1
3,581,640	+				+0.3
3,581,640	+				-0.2
3,581,640	+				-0.2
3,581,640	+				-0.3
3,581,641	-				-0.3
3,581,641	-				-0.1
3,581,753	+		ECD_03405	0.42	+0.0
3,581,754	-		ECD_03405	0.42	+0.5
3,581,805	-		ECD_03405	0.59	+0.2
3,581,904	+				+1.3
3,581,988	+				-0.3
3,581,989	-				-0.3
3,582,075	+				+0.1
3,582,075	+				-0.2
3,582,075	+				+0.3
3,582,075	+				-0.3
3,582,078	+				+1.1
3,582,118	+				+0.5
3,582,194	+				-0.1
3,582,194	+				-1.6
3,582,197	+				+0.4
3,582,197	+				+0.3
3,582,202	+				-0.2
3,582,202	+				-0.3
3,582,202	+				+0.7
3,582,424	+				-0.1
3,582,643	-		ECD_03407	0.27	-0.3