Strain Fitness in Escherichia coli BL21 around ECD_03377

Experiment: Mixed culture, Halobacteriovorax-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture, Halobacteriovorax-1
3,543,892	-		ECD_03376	0.42	-0.5
3,543,926	-		ECD_03376	0.45	+0.0
3,543,945	+		ECD_03376	0.46	-1.2
3,543,951	+		ECD_03376	0.47	+0.4
3,543,951	+		ECD_03376	0.47	+0.1
3,543,951	+		ECD_03376	0.47	+0.5
3,543,952	-		ECD_03376	0.47	+0.3
3,543,952	-		ECD_03376	0.47	-0.0
3,543,956	+		ECD_03376	0.47	+0.3
3,543,966	+		ECD_03376	0.48	+0.6
3,544,017	+		ECD_03376	0.52	+0.1
3,544,017	+		ECD_03376	0.52	-1.0
3,544,044	+		ECD_03376	0.54	-0.3
3,544,044	+		ECD_03376	0.54	+0.1
3,544,045	-		ECD_03376	0.54	+0.1
3,544,065	+		ECD_03376	0.56	-0.3
3,544,066	-		ECD_03376	0.56	-0.5
3,544,192	-		ECD_03376	0.66	-0.9
3,544,356	+		ECD_03376	0.78	+0.3
3,544,356	+		ECD_03376	0.78	-0.4
3,544,356	+		ECD_03376	0.78	+0.1
3,544,357	-		ECD_03376	0.78	+0.3
3,544,365	+		ECD_03376	0.79	+0.1
3,544,380	+		ECD_03376	0.80	+0.3
3,544,380	+		ECD_03376	0.80	+0.4
3,544,397	+		ECD_03376	0.81	+0.1
3,544,397	+		ECD_03376	0.81	+0.2
3,544,398	-		ECD_03376	0.82	-0.0
3,544,500	+		ECD_03376	0.89	-1.7
3,544,501	-		ECD_03376	0.90	-0.2
3,544,556	+				+0.2
3,544,575	+				-0.5
3,544,576	-				+0.2
3,544,635	+				+0.1
3,544,693	-				+0.1
3,544,802	-				-0.5
3,544,819	+				-0.8
3,544,893	-				-0.7
3,544,959	+				-1.0
3,544,986	-				-0.7
3,545,049	+		ECD_03377	0.12	-1.5
3,545,186	+		ECD_03377	0.19	-0.2
3,545,186	+		ECD_03377	0.19	-0.9
3,545,259	-		ECD_03377	0.23	-0.2
3,545,270	+		ECD_03377	0.23	-0.1
3,545,270	+		ECD_03377	0.23	-0.9
3,545,271	-		ECD_03377	0.23	-0.3
3,545,322	-		ECD_03377	0.26	-1.0
3,545,322	-		ECD_03377	0.26	-0.2
3,545,470	-		ECD_03377	0.33	-0.5
3,545,555	+		ECD_03377	0.38	-0.6
3,545,726	+		ECD_03377	0.47	-0.3
3,545,726	+		ECD_03377	0.47	-0.3
3,545,726	+		ECD_03377	0.47	+0.8
3,545,726	+		ECD_03377	0.47	-0.6
3,545,823	+		ECD_03377	0.52	-0.7
3,545,876	+		ECD_03377	0.54	-1.3
3,545,877	-		ECD_03377	0.54	-1.1
3,545,877	-		ECD_03377	0.54	-0.5
3,545,877	-		ECD_03377	0.54	+0.6
3,546,103	+		ECD_03377	0.66	-0.1
3,546,104	-		ECD_03377	0.66	-0.2
3,546,137	-		ECD_03377	0.68	-0.6
3,546,137	-		ECD_03377	0.68	-0.9
3,546,137	-		ECD_03377	0.68	-0.8
3,546,153	-		ECD_03377	0.68	-1.3
3,546,359	+		ECD_03377	0.79	-0.0
3,546,360	-		ECD_03377	0.79	-1.6
3,546,360	-		ECD_03377	0.79	+0.2
3,546,361	+		ECD_03377	0.79	-1.2
3,546,361	+		ECD_03377	0.79	-0.7
3,546,362	-		ECD_03377	0.79	-0.5
3,546,362	-		ECD_03377	0.79	-1.3
3,546,362	-		ECD_03377	0.79	-0.3
3,546,365	+		ECD_03377	0.79	-0.6
3,546,366	-		ECD_03377	0.79	-0.8
3,546,384	+		ECD_03377	0.80	-0.9
3,546,387	+		ECD_03377	0.80	-0.2
3,546,434	-		ECD_03377	0.83	-0.5
3,546,477	-		ECD_03377	0.85	-1.1
3,546,546	+		ECD_03377	0.89	-0.7
3,546,547	-		ECD_03377	0.89	-0.4
3,546,547	-		ECD_03377	0.89	-0.9
3,546,579	-				-0.5
3,546,579	-				-0.1
3,546,579	-				-0.6
3,546,579	-				+0.3
3,546,593	+				-0.8
3,546,594	-				-0.6
3,546,612	-				-0.7
3,546,637	-				-0.7
3,546,686	+				+0.2
3,546,688	+				-0.8
3,546,799	-				-0.1
3,546,799	-				-0.3
3,546,845	-				-0.5
3,546,846	+				-0.3
3,546,889	+				-0.1
3,546,890	-				-0.7
3,546,906	+				+0.3
3,546,963	+				-0.9
3,546,963	+				+0.4
3,546,963	+				+0.1
3,546,963	+				+0.2
3,546,964	-				-0.5
3,546,964	-				+0.1
3,546,964	-				+0.8
3,546,968	-				+0.4
3,547,043	+				+0.3
3,547,044	-				-0.8
3,547,059	+				+0.4
3,547,059	+				-0.4
3,547,288	+		ECD_03378	0.12	+0.5
3,547,288	+		ECD_03378	0.12	-0.4
3,547,289	-		ECD_03378	0.12	+0.3
3,547,289	-		ECD_03378	0.12	+0.0
3,547,334	-		ECD_03378	0.13	+1.0
3,547,394	+		ECD_03378	0.15	+0.4
3,547,394	+		ECD_03378	0.15	+0.5
3,547,396	+		ECD_03378	0.15	-0.6
3,547,396	+		ECD_03378	0.15	+0.1
3,547,396	+		ECD_03378	0.15	-0.2
3,547,396	+		ECD_03378	0.15	-0.0
3,547,397	-		ECD_03378	0.15	+0.9
3,547,397	-		ECD_03378	0.15	+0.3
3,547,397	-		ECD_03378	0.15	-1.4
3,547,397	-		ECD_03378	0.15	-0.0
3,547,397	-		ECD_03378	0.15	+1.8
3,547,397	-		ECD_03378	0.15	+0.5
3,547,399	+		ECD_03378	0.15	-0.4
3,547,399	+		ECD_03378	0.15	+0.6
3,547,400	-		ECD_03378	0.15	-0.3
3,547,400	-		ECD_03378	0.15	+0.1
3,547,400	-		ECD_03378	0.15	+0.3
3,547,403	-		ECD_03378	0.15	-0.0
3,547,431	-		ECD_03378	0.16	+0.2
3,547,537	-		ECD_03378	0.19	-0.2
3,547,663	+		ECD_03378	0.22	-0.4
3,547,663	+		ECD_03378	0.22	-0.6
3,547,664	-		ECD_03378	0.22	+0.0
3,547,664	-		ECD_03378	0.22	-1.8
3,547,664	-		ECD_03378	0.22	-0.0