Strain Fitness in Escherichia coli BL21 around ECD_03343

Experiment: Mixed culture, Halobacteriovorax-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture, Halobacteriovorax-1
3,500,844	-		ECD_03342	0.54	+0.2
3,500,896	-		ECD_03342	0.58	-0.3
3,500,896	-		ECD_03342	0.58	-1.0
3,500,986	+		ECD_03342	0.64	-0.8
3,501,011	+		ECD_03342	0.66	-1.7
3,501,011	+		ECD_03342	0.66	-2.0
3,501,218	-		ECD_03342	0.79	-2.0
3,501,284	+		ECD_03342	0.84	-1.1
3,501,285	-		ECD_03342	0.84	-1.1
3,501,285	-		ECD_03342	0.84	-0.7
3,501,342	-		ECD_03342	0.88	-0.7
3,501,364	+		ECD_03342	0.89	-1.6
3,501,364	+		ECD_03342	0.89	+0.5
3,501,373	-		ECD_03342	0.90	-0.9
3,501,373	-		ECD_03342	0.90	-0.9
3,501,405	+				-0.0
3,501,406	-				+0.4
3,501,500	+				+0.2
3,501,531	-				-0.5
3,501,706	-				-0.2
3,501,754	-				+0.2
3,501,754	-				+0.2
3,501,756	+				-0.2
3,501,772	-				+0.3
3,501,869	-		ECD_03343	0.29	-0.0
3,501,906	+		ECD_03343	0.40	+0.3
3,501,906	+		ECD_03343	0.40	-1.0
3,501,906	+		ECD_03343	0.40	+0.2
3,501,907	-		ECD_03343	0.41	+0.1
3,501,907	-		ECD_03343	0.41	+0.0
3,501,907	-		ECD_03343	0.41	+0.2
3,501,907	-		ECD_03343	0.41	-0.3
3,501,907	-		ECD_03343	0.41	+0.3
3,501,907	-		ECD_03343	0.41	+0.3
3,501,911	-		ECD_03343	0.42	-0.2
3,501,911	-		ECD_03343	0.42	-1.0
3,501,911	-		ECD_03343	0.42	-0.4
3,501,912	+		ECD_03343	0.42	-0.5
3,501,912	+		ECD_03343	0.42	+0.1
3,501,912	+		ECD_03343	0.42	-0.1
3,501,913	-		ECD_03343	0.43	+0.2
3,501,913	-		ECD_03343	0.43	-1.6
3,501,978	+		ECD_03343	0.62	-1.5
3,501,979	-		ECD_03343	0.62	-0.1
3,501,979	-		ECD_03343	0.62	-0.2
3,501,984	+		ECD_03343	0.64	+0.5
3,502,003	+		ECD_03343	0.69	-0.6
3,502,004	-		ECD_03343	0.70	-0.0
3,502,016	+		ECD_03343	0.73	-0.5
3,502,074	-				+0.5
3,502,074	-				-0.1
3,502,074	-				+0.3
3,502,074	-				-0.3
3,502,074	-				+0.0
3,502,105	+				+0.4
3,502,105	+				+0.3
3,502,105	+				-0.2
3,502,106	-				+0.6
3,502,106	-				-0.2
3,502,106	-				+0.2
3,502,106	-				-0.0
3,502,106	-				-0.1
3,502,106	-				+0.6
3,502,106	-				+0.7
3,502,231	+				+0.2
3,502,232	-				-0.1
3,502,232	-				-0.1
3,502,233	+				+1.0
3,502,233	+				+0.2
3,502,234	-				+0.0
3,502,234	-				+0.5
3,502,234	-				-0.3
3,502,237	+				-0.1
3,502,237	+				-0.0
3,502,238	-				+0.1
3,502,238	-				+0.3
3,502,238	-				+0.1
3,502,242	+				+0.4
3,502,287	+				-0.0
3,502,287	+				-0.2
3,502,290	-				+0.1
3,502,290	-				+0.0
3,502,290	-				+0.1
3,502,315	-				+0.3
3,502,321	+				-0.1
3,502,355	+				-0.1
3,502,355	+				-0.8
3,502,358	-				-0.6
3,502,362	+				+0.2
3,502,374	+				-0.1
3,502,413	+				-0.5
3,502,414	-				+0.1
3,502,414	-				+0.0
3,502,414	-				-0.2
3,502,436	+				+0.3
3,502,437	-				+0.4
3,502,495	+				+0.2
3,502,495	+				+0.3
3,502,495	+				-0.6
3,502,496	-				-1.0
3,502,496	-				+0.3
3,502,502	+				+0.6
3,502,502	+				+0.4
3,502,504	+				-0.2
3,502,504	+				+0.7
3,502,505	-				-0.6
3,502,583	+		ECD_03344	0.20	-0.2
3,502,584	-		ECD_03344	0.20	-0.1
3,502,617	+		ECD_03344	0.28	-0.1
3,502,617	+		ECD_03344	0.28	+1.1
3,502,617	+		ECD_03344	0.28	-0.4
3,502,617	+		ECD_03344	0.28	-0.1
3,502,618	-		ECD_03344	0.28	-0.1
3,502,618	-		ECD_03344	0.28	-1.7
3,502,618	-		ECD_03344	0.28	+0.6
3,502,618	-		ECD_03344	0.28	-0.5
3,502,622	+		ECD_03344	0.29	-0.3
3,502,622	+		ECD_03344	0.29	-0.2
3,502,622	+		ECD_03344	0.29	+0.2
3,502,632	+		ECD_03344	0.31	+0.8
3,502,633	-		ECD_03344	0.31	-0.5
3,502,633	-		ECD_03344	0.31	+0.0
3,502,633	-		ECD_03344	0.31	+0.1
3,502,634	+		ECD_03344	0.32	-0.4
3,502,634	+		ECD_03344	0.32	-0.1
3,502,635	-		ECD_03344	0.32	+0.3
3,502,635	-		ECD_03344	0.32	-0.2
3,502,645	+		ECD_03344	0.34	-1.4
3,502,646	-		ECD_03344	0.34	+0.4
3,502,646	-		ECD_03344	0.34	+0.1
3,502,895	-				+1.8
3,502,895	-				+0.2
3,502,928	+				-0.1
3,502,928	+				+0.1
3,502,928	+				-0.2
3,502,929	-				-0.3
3,502,941	-				+0.3
3,502,965	+				-0.2
3,502,966	-				+0.3