Strain Fitness in Escherichia coli BL21 around ECD_03341

Experiment: Mixed culture, Halobacteriovorax-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture, Halobacteriovorax-1
3,497,677	-		ECD_03340	0.43	-0.6
3,497,677	-		ECD_03340	0.43	+0.9
3,497,747	+		ECD_03340	0.49	+0.8
3,497,759	-		ECD_03340	0.51	-0.1
3,497,759	-		ECD_03340	0.51	-0.9
3,497,759	-		ECD_03340	0.51	+0.2
3,497,763	-		ECD_03340	0.51	+0.3
3,497,774	-		ECD_03340	0.52	-0.2
3,497,784	+		ECD_03340	0.53	-0.1
3,497,801	-		ECD_03340	0.55	+1.0
3,497,833	+		ECD_03340	0.58	-0.2
3,497,870	+		ECD_03340	0.61	-0.9
3,497,951	-		ECD_03340	0.69	+0.1
3,497,952	+		ECD_03340	0.69	+0.1
3,497,952	+		ECD_03340	0.69	-0.2
3,497,952	+		ECD_03340	0.69	+0.1
3,497,953	-		ECD_03340	0.69	+0.2
3,497,999	+		ECD_03340	0.73	+0.6
3,498,006	-		ECD_03340	0.74	+0.1
3,498,074	+		ECD_03340	0.81	-0.9
3,498,075	-		ECD_03340	0.81	-0.1
3,498,228	-				-0.1
3,498,228	-				-0.2
3,498,349	-				-1.0
3,498,360	-				+0.3
3,498,419	-				-0.2
3,498,473	+				+0.1
3,498,474	-				+0.6
3,498,474	-				-0.9
3,498,474	-				-0.4
3,498,529	-				+0.0
3,498,529	-				-0.6
3,498,569	+				+0.2
3,498,589	+				-0.5
3,498,662	-				-0.9
3,498,664	-				+0.1
3,498,664	-				+0.1
3,498,708	+				+0.4
3,498,708	+				-0.0
3,498,709	-				-0.0
3,498,818	+		ECD_03341	0.19	+0.4
3,498,819	-		ECD_03341	0.19	+0.1
3,498,935	+		ECD_03341	0.28	+0.8
3,499,092	-		ECD_03341	0.41	+0.0
3,499,112	+		ECD_03341	0.43	+0.8
3,499,184	+		ECD_03341	0.49	+0.5
3,499,185	-		ECD_03341	0.49	-0.0
3,499,273	+		ECD_03341	0.57	+0.3
3,499,273	+		ECD_03341	0.57	-0.0
3,499,273	+		ECD_03341	0.57	+0.1
3,499,274	-		ECD_03341	0.57	+0.4
3,499,274	-		ECD_03341	0.57	-0.2
3,499,411	+		ECD_03341	0.68	+0.9
3,499,565	-		ECD_03341	0.81	-0.1
3,499,612	-		ECD_03341	0.85	+0.3
3,499,630	-		ECD_03341	0.86	+0.1
3,499,630	-		ECD_03341	0.86	-0.3
3,499,667	-		ECD_03341	0.89	+0.5
3,499,691	-				+0.2
3,499,770	-				-0.1
3,499,771	+				+0.1
3,499,771	+				+0.5
3,499,772	-				+0.9
3,499,774	+				-0.9
3,499,774	+				+0.2
3,499,775	-				-1.2
3,499,864	-				+0.7
3,499,867	-				-0.4
3,499,870	-				+0.5
3,500,026	+				-0.5
3,500,031	+				-0.8
3,500,031	+				+0.5
3,500,032	-				-0.6
3,500,032	-				-0.5
3,500,156	+				-1.1
3,500,157	-				-1.0
3,500,157	-				-2.0
3,500,157	-				-0.1
3,500,246	+		ECD_03342	0.15	-0.6
3,500,247	-		ECD_03342	0.15	-0.6
3,500,260	+		ECD_03342	0.16	-1.9
3,500,260	+		ECD_03342	0.16	-1.1
3,500,260	+		ECD_03342	0.16	-0.6
3,500,287	+		ECD_03342	0.17	-2.0
3,500,323	+		ECD_03342	0.20	-2.5
3,500,323	+		ECD_03342	0.20	-0.1
3,500,323	+		ECD_03342	0.20	-0.9
3,500,363	+		ECD_03342	0.22	-1.5
3,500,659	+		ECD_03342	0.42	-1.0
3,500,737	+		ECD_03342	0.47	-0.4
3,500,737	+		ECD_03342	0.47	-0.9
3,500,738	-		ECD_03342	0.47	+0.1
3,500,738	-		ECD_03342	0.47	-0.5