Strain Fitness in Escherichia coli BL21 around ECD_02881

Experiment: Mixed culture, Halobacteriovorax-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture, Halobacteriovorax-1
3,018,700	-				+0.5
3,018,775	-		ECD_02880	0.12	-0.3
3,018,775	-		ECD_02880	0.12	+0.2
3,018,775	-		ECD_02880	0.12	-0.2
3,018,775	-		ECD_02880	0.12	-0.4
3,018,831	+		ECD_02880	0.20	-0.3
3,018,831	+		ECD_02880	0.20	+0.3
3,018,832	-		ECD_02880	0.20	-1.3
3,018,832	-		ECD_02880	0.20	+0.5
3,018,832	-		ECD_02880	0.20	+0.5
3,018,832	-		ECD_02880	0.20	+0.6
3,018,832	-		ECD_02880	0.20	-0.1
3,018,832	-		ECD_02880	0.20	-0.4
3,018,832	-		ECD_02880	0.20	-0.9
3,018,832	-		ECD_02880	0.20	-0.7
3,018,838	+		ECD_02880	0.21	-0.2
3,018,838	+		ECD_02880	0.21	-0.1
3,018,838	+		ECD_02880	0.21	+0.9
3,018,838	+		ECD_02880	0.21	-0.8
3,018,838	+		ECD_02880	0.21	+2.1
3,018,838	+		ECD_02880	0.21	-0.3
3,018,838	+		ECD_02880	0.21	+0.5
3,018,839	-		ECD_02880	0.21	-0.9
3,018,839	-		ECD_02880	0.21	-0.4
3,018,839	-		ECD_02880	0.21	+0.3
3,018,885	+		ECD_02880	0.27	+0.1
3,018,953	+		ECD_02880	0.36	+0.2
3,019,091	+		ECD_02880	0.55	-0.9
3,019,091	+		ECD_02880	0.55	-0.1
3,019,091	+		ECD_02880	0.55	-0.5
3,019,092	-		ECD_02880	0.55	-0.5
3,019,092	-		ECD_02880	0.55	-0.7
3,019,101	-		ECD_02880	0.56	+0.6
3,019,101	-		ECD_02880	0.56	+0.3
3,019,101	-		ECD_02880	0.56	-0.7
3,019,103	+		ECD_02880	0.57	+0.2
3,019,104	-		ECD_02880	0.57	-0.2
3,019,113	-		ECD_02880	0.58	-0.2
3,019,174	-		ECD_02880	0.66	-0.0
3,019,292	+		ECD_02880	0.82	+0.0
3,019,332	-		ECD_02880	0.88	-0.3
3,019,352	+				-0.0
3,019,353	-				-0.4
3,019,375	+				-0.3
3,019,376	-				+0.7
3,019,426	+				-0.3
3,019,426	+				+0.3
3,019,460	-				+2.4
3,019,460	-				+0.4
3,019,462	+				+0.1
3,019,462	+				-0.3
3,019,462	+				+0.1
3,019,500	+				-0.5
3,019,520	-				+0.3
3,019,594	+				-0.4
3,019,624	+				+0.6
3,019,625	-				-0.2
3,019,652	+				-0.1
3,019,654	+				+0.3
3,019,743	+				-0.1
3,019,747	+				-0.3
3,019,747	+				-0.2
3,019,748	-				-1.2
3,019,786	+				-1.0
3,019,873	-		ECD_02881	0.17	-0.2
3,019,945	+		ECD_02881	0.23	-0.0
3,019,946	-		ECD_02881	0.23	-1.5
3,020,114	+		ECD_02881	0.37	-0.9
3,020,117	-		ECD_02881	0.37	-0.5
3,020,218	+		ECD_02881	0.46	-1.4
3,020,219	-		ECD_02881	0.46	-1.5
3,020,219	-		ECD_02881	0.46	-1.6
3,020,304	-		ECD_02881	0.53	-0.5
3,020,385	-		ECD_02881	0.60	-0.4
3,020,420	+		ECD_02881	0.63	-1.0
3,020,420	+		ECD_02881	0.63	-0.1
3,020,420	+		ECD_02881	0.63	-0.6
3,020,421	-		ECD_02881	0.63	-0.9
3,020,421	-		ECD_02881	0.63	-0.4
3,020,421	-		ECD_02881	0.63	-0.4
3,020,421	-		ECD_02881	0.63	+0.2
3,020,422	+		ECD_02881	0.63	+0.6
3,020,422	+		ECD_02881	0.63	+0.7
3,020,422	+		ECD_02881	0.63	-0.4
3,020,422	+		ECD_02881	0.63	-0.3
3,020,422	+		ECD_02881	0.63	-0.4
3,020,422	+		ECD_02881	0.63	+0.1
3,020,423	-		ECD_02881	0.63	-0.5
3,020,423	-		ECD_02881	0.63	-0.5
3,020,423	-		ECD_02881	0.63	+1.4
3,020,423	-		ECD_02881	0.63	-1.9
3,020,423	-		ECD_02881	0.63	-0.5
3,020,424	+		ECD_02881	0.63	-0.9
3,020,424	+		ECD_02881	0.63	-0.3
3,020,424	+		ECD_02881	0.63	-0.9
3,020,425	-		ECD_02881	0.63	-0.7
3,020,448	+		ECD_02881	0.65	-0.8
3,020,449	-		ECD_02881	0.65	+0.4
3,020,585	-		ECD_02881	0.77	-1.2
3,020,618	-		ECD_02881	0.80	-0.2
3,020,652	-		ECD_02881	0.82	-0.5
3,020,734	+		ECD_02881	0.89	-1.4
3,020,794	+				+0.1
3,020,794	+				-0.8
3,020,795	-				+0.2
3,020,856	+				+0.4
3,020,857	-				-1.0
3,020,857	-				+0.2
3,020,893	+				+0.1
3,020,894	-				-0.3
3,020,909	+				+0.0
3,020,954	+				-0.1
3,020,954	+				+0.1
3,020,954	+				-0.1
3,020,955	-				+0.1
3,020,955	-				-0.3
3,020,959	+				+0.1
3,020,959	+				-0.4
3,020,960	-				-0.1
3,020,968	-				-0.1
3,020,968	-				-0.1
3,020,968	-				-0.4
3,020,975	+				+0.5
3,020,976	-				-0.3
3,021,008	+				-1.1
3,021,008	+				-0.4
3,021,017	+				+0.6
3,021,018	-				+0.4
3,021,018	-				+0.2
3,021,069	-		ECD_02882	0.10	-0.0
3,021,075	-		ECD_02882	0.11	+0.1
3,021,084	+		ECD_02882	0.13	+0.4
3,021,084	+		ECD_02882	0.13	+0.7
3,021,084	+		ECD_02882	0.13	-0.7
3,021,164	-		ECD_02882	0.25	+0.2
3,021,209	+		ECD_02882	0.32	+0.6
3,021,258	+		ECD_02882	0.39	-0.8
3,021,258	+		ECD_02882	0.39	+0.2
3,021,258	+		ECD_02882	0.39	+0.2
3,021,259	-		ECD_02882	0.39	+0.8
3,021,259	-		ECD_02882	0.39	-0.9
3,021,261	-		ECD_02882	0.40	+0.5
3,021,261	-		ECD_02882	0.40	+0.1
3,021,284	+		ECD_02882	0.43	+0.2
3,021,323	+		ECD_02882	0.49	-0.2
3,021,324	-		ECD_02882	0.49	+0.6
3,021,327	+		ECD_02882	0.50	-2.4
3,021,328	-		ECD_02882	0.50	+0.0
3,021,328	-		ECD_02882	0.50	+0.4
3,021,407	+		ECD_02882	0.62	+0.6
3,021,523	+		ECD_02882	0.79	+0.1
3,021,523	+		ECD_02882	0.79	+0.0
3,021,523	+		ECD_02882	0.79	-0.1
3,021,523	+		ECD_02882	0.79	-0.3
3,021,523	+		ECD_02882	0.79	+0.2
3,021,524	-		ECD_02882	0.79	-0.5
3,021,527	+		ECD_02882	0.80	+1.1
3,021,528	-		ECD_02882	0.80	-0.4
3,021,528	-		ECD_02882	0.80	+0.3
3,021,636	-				-1.2
3,021,645	+				+0.4
3,021,697	-				-0.5
3,021,697	-				-0.3
3,021,700	+				+0.0
3,021,701	-				-0.1
3,021,758	-				+0.1
3,021,758	-				+0.9
3,021,758	-				+0.4
3,021,764	+				+0.2
3,021,860	+		ECD_02883	0.17	-0.1