Strain Fitness in Escherichia coli BL21 around ECD_02666

Experiment: Mixed culture, Halobacteriovorax-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture, Halobacteriovorax-1
2,786,587	+		ECD_02665	0.44	-2.1
2,786,588	-		ECD_02665	0.44	+0.8
2,786,588	-		ECD_02665	0.44	+0.1
2,786,588	-		ECD_02665	0.44	+0.2
2,786,588	-		ECD_02665	0.44	+0.2
2,786,588	-		ECD_02665	0.44	-0.4
2,786,588	-		ECD_02665	0.44	+0.4
2,786,588	-		ECD_02665	0.44	+0.1
2,786,588	-		ECD_02665	0.44	+0.3
2,786,588	-		ECD_02665	0.44	-0.1
2,786,588	-		ECD_02665	0.44	+0.0
2,786,598	-		ECD_02665	0.45	+0.1
2,786,598	-		ECD_02665	0.45	-0.8
2,786,598	-		ECD_02665	0.45	-1.4
2,786,637	+		ECD_02665	0.48	+0.1
2,786,637	+		ECD_02665	0.48	-0.1
2,786,638	-		ECD_02665	0.48	+1.0
2,786,638	-		ECD_02665	0.48	-0.1
2,786,672	-		ECD_02665	0.51	-0.0
2,786,720	+		ECD_02665	0.54	+0.8
2,786,721	-		ECD_02665	0.55	+0.0
2,786,721	-		ECD_02665	0.55	+0.8
2,786,721	-		ECD_02665	0.55	+1.0
2,786,721	-		ECD_02665	0.55	-0.3
2,786,809	+		ECD_02665	0.62	-0.7
2,786,809	+		ECD_02665	0.62	-1.6
2,786,810	-		ECD_02665	0.62	+0.0
2,786,889	-		ECD_02665	0.68	+0.4
2,786,941	-		ECD_02665	0.72	+0.1
2,786,958	+		ECD_02665	0.73	+1.0
2,787,058	-		ECD_02665	0.81	-0.3
2,787,058	-		ECD_02665	0.81	+0.2
2,787,092	+		ECD_02665	0.84	+0.7
2,787,093	-		ECD_02665	0.84	+0.6
2,787,111	-		ECD_02665	0.86	-0.0
2,787,111	-		ECD_02665	0.86	+0.4
2,787,111	-		ECD_02665	0.86	-0.1
2,787,111	-		ECD_02665	0.86	-0.2
2,787,112	+		ECD_02665	0.86	+0.4
2,787,112	+		ECD_02665	0.86	-1.1
2,787,112	+		ECD_02665	0.86	+0.4
2,787,113	-		ECD_02665	0.86	-0.3
2,787,151	+		ECD_02665	0.89	+0.5
2,787,152	-		ECD_02665	0.89	+1.0
2,787,152	-		ECD_02665	0.89	+0.0
2,787,217	-				+0.3
2,787,217	-				-0.3
2,787,315	-				-0.2
2,787,315	-				+0.1
2,787,323	+				-1.2
2,787,324	-				+0.5
2,787,324	-				-0.9
2,787,331	-				-0.4
2,787,331	-				-0.5
2,787,383	-				+0.1
2,787,405	+				-0.3
2,787,405	+				+0.5
2,787,420	-				-0.3
2,787,536	+				-3.9
2,787,537	-				-1.6
2,787,576	+				-1.0
2,787,576	+				-2.5
2,787,576	+				-1.3
2,787,576	+				-1.0
2,787,577	-				-1.2
2,787,578	+				-2.7
2,787,578	+				-1.5
2,787,578	+				-1.3
2,787,653	+				-1.9
2,787,653	+				-1.6
2,787,703	+		ECD_02666	0.14	-0.6
2,787,703	+		ECD_02666	0.14	-1.5
2,787,703	+		ECD_02666	0.14	-2.0
2,787,708	+		ECD_02666	0.14	-0.6
2,787,708	+		ECD_02666	0.14	-1.4
2,787,765	+		ECD_02666	0.18	-2.4
2,787,765	+		ECD_02666	0.18	-1.2
2,787,766	-		ECD_02666	0.18	-1.3
2,787,777	-		ECD_02666	0.19	-1.4
2,787,778	+		ECD_02666	0.19	-4.2
2,787,778	+		ECD_02666	0.19	-1.2
2,787,778	+		ECD_02666	0.19	-3.3
2,787,778	+		ECD_02666	0.19	-1.8
2,787,778	+		ECD_02666	0.19	-1.6
2,787,778	+		ECD_02666	0.19	-2.1
2,787,778	+		ECD_02666	0.19	-1.2
2,787,778	+		ECD_02666	0.19	-1.3
2,787,778	+		ECD_02666	0.19	-1.7
2,787,778	+		ECD_02666	0.19	-1.2
2,787,778	+		ECD_02666	0.19	-2.1
2,787,779	-		ECD_02666	0.19	-1.6
2,787,842	+		ECD_02666	0.24	-1.7
2,787,843	-		ECD_02666	0.24	-1.5
2,787,843	-		ECD_02666	0.24	+0.5
2,787,845	+		ECD_02666	0.24	-2.2
2,787,846	-		ECD_02666	0.24	-0.7
2,787,896	+		ECD_02666	0.28	-1.5
2,787,897	-		ECD_02666	0.28	-1.3
2,787,897	-		ECD_02666	0.28	-3.0
2,787,924	-		ECD_02666	0.30	-1.0
2,787,960	+		ECD_02666	0.33	-1.4
2,788,030	+		ECD_02666	0.38	-1.6
2,788,031	-		ECD_02666	0.38	-1.9
2,788,166	+		ECD_02666	0.48	-1.6
2,788,166	+		ECD_02666	0.48	-2.3
2,788,167	-		ECD_02666	0.48	-2.9
2,788,181	+		ECD_02666	0.49	-2.5
2,788,248	+		ECD_02666	0.55	-0.2
2,788,248	+		ECD_02666	0.55	-3.1
2,788,248	+		ECD_02666	0.55	-0.9
2,788,248	+		ECD_02666	0.55	-2.3
2,788,248	+		ECD_02666	0.55	-1.7
2,788,248	+		ECD_02666	0.55	-1.4
2,788,321	+		ECD_02666	0.60	-2.8
2,788,321	+		ECD_02666	0.60	-1.3
2,788,321	+		ECD_02666	0.60	-2.7
2,788,329	+		ECD_02666	0.61	-1.3
2,788,481	+		ECD_02666	0.72	-1.6
2,788,481	+		ECD_02666	0.72	-2.0
2,788,481	+		ECD_02666	0.72	-1.2
2,788,538	+		ECD_02666	0.76	-2.7
2,788,538	+		ECD_02666	0.76	-2.0
2,788,559	+		ECD_02666	0.78	-1.3
2,788,578	+		ECD_02666	0.79	-1.6
2,788,702	+		ECD_02666	0.89	-1.8
2,788,734	-				-0.0
2,788,806	+				-1.6
2,788,806	+				-2.2
2,788,806	+				-1.5
2,788,806	+				-2.2
2,788,806	+				-2.1
2,788,807	-				+0.1
2,788,812	+				-3.0
2,788,813	-				-1.2
2,788,910	+				-0.2
2,788,910	+				+0.3
2,788,910	+				-0.1
2,788,911	-				-1.2
2,788,911	-				+0.8
2,788,911	-				-0.0
2,788,916	+				-0.0
2,788,916	+				-0.3
2,788,917	-				+0.4
2,788,917	-				+0.3
2,788,929	+				-0.5
2,788,929	+				+0.7
2,788,929	+				+0.7
2,788,929	+				+0.7
2,788,929	+				-1.5
2,788,929	+				+0.0
2,788,929	+				+0.4
2,788,929	+				-0.3
2,788,929	+				+0.6
2,788,930	-				-0.4
2,788,930	-				+0.5
2,788,930	-				+0.2
2,788,962	+				+0.5
2,788,963	-				+0.3
2,788,984	+				+0.4
2,788,984	+				+0.8
2,788,984	+				-0.7
2,788,984	+				-0.6
2,788,984	+				-0.2
2,788,984	+				-0.3
2,788,984	+				+0.8
2,788,985	-				-0.0
2,788,985	-				+0.3
2,788,985	-				-0.7
2,788,987	+				+0.1
2,788,987	+				+0.1
2,788,988	-				+0.1
2,788,989	+				-0.0
2,788,989	+				-0.2
2,788,990	-				-0.5
2,788,990	-				-3.2
2,788,990	-				+0.1
2,789,003	+				-0.4
2,789,042	+				+0.5
2,789,043	-				+0.6
2,789,043	-				-0.6
2,789,043	-				-0.4
2,789,045	-				+0.6
2,789,124	+		ECD_02667	0.11	-0.6
2,789,124	+		ECD_02667	0.11	-0.4
2,789,124	+		ECD_02667	0.11	-0.3
2,789,124	+		ECD_02667	0.11	-2.2
2,789,124	+		ECD_02667	0.11	-0.8
2,789,124	+		ECD_02667	0.11	-1.2
2,789,124	+		ECD_02667	0.11	-0.4
2,789,124	+		ECD_02667	0.11	-0.4
2,789,124	+		ECD_02667	0.11	+0.1
2,789,125	-		ECD_02667	0.11	+0.3
2,789,128	+		ECD_02667	0.12	-2.4
2,789,128	+		ECD_02667	0.12	-0.4
2,789,128	+		ECD_02667	0.12	-0.6
2,789,129	-		ECD_02667	0.12	-0.7
2,789,145	+		ECD_02667	0.13	+0.2
2,789,145	+		ECD_02667	0.13	-0.3
2,789,146	-		ECD_02667	0.13	-0.4
2,789,146	-		ECD_02667	0.13	+0.7
2,789,146	-		ECD_02667	0.13	-0.6
2,789,146	-		ECD_02667	0.13	-1.0
2,789,146	-		ECD_02667	0.13	-0.2
2,789,184	+		ECD_02667	0.15	-0.3
2,789,184	+		ECD_02667	0.15	-0.6
2,789,185	-		ECD_02667	0.15	+0.7
2,789,185	-		ECD_02667	0.15	+0.1
2,789,185	-		ECD_02667	0.15	+0.6
2,789,185	-		ECD_02667	0.15	+0.0
2,789,185	-		ECD_02667	0.15	-0.4
2,789,187	+		ECD_02667	0.15	-1.7
2,789,187	+		ECD_02667	0.15	+0.3
2,789,187	+		ECD_02667	0.15	+0.2
2,789,313	-		ECD_02667	0.22	+0.5
2,789,453	-		ECD_02667	0.29	+0.1
2,789,529	+		ECD_02667	0.34	-0.2
2,789,531	+		ECD_02667	0.34	+0.6
2,789,531	+		ECD_02667	0.34	+1.2
2,789,572	-		ECD_02667	0.36	-0.0
2,789,607	+		ECD_02667	0.38	-0.9
2,789,756	-		ECD_02667	0.46	+1.0
2,789,796	-		ECD_02667	0.48	-0.5