Strain Fitness in Escherichia coli BL21 around ECD_01965
Experiment: Mixed culture, Halobacteriovorax-1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Mixed culture, Halobacteriovorax-1 |
---|---|---|---|---|---|
remove | |||||
2,031,349 | + | ECD_01964 | 0.56 | -0.6 | |
2,031,353 | - | ECD_01964 | 0.57 | -0.4 | |
2,031,509 | + | ECD_01964 | 0.89 | -1.4 | |
2,031,642 | + | +1.1 | |||
2,031,643 | - | +1.5 | |||
2,031,942 | + | ECD_01965 | 0.45 | +0.4 | |
2,031,972 | - | ECD_01965 | 0.48 | +0.5 | |
2,032,046 | + | ECD_01965 | 0.57 | +0.8 | |
2,032,141 | - | ECD_01965 | 0.69 | +0.4 | |
2,032,173 | + | ECD_01965 | 0.72 | -0.5 | |
2,032,219 | - | ECD_01965 | 0.78 | -0.2 | |
2,032,374 | + | -0.0 | |||
2,032,376 | + | -0.2 | |||
2,032,376 | + | +0.2 | |||
2,032,377 | - | +0.1 | |||
2,032,422 | + | +0.0 | |||
2,032,753 | + | ECD_01966 | 0.12 | -0.5 | |
2,032,872 | - | ECD_01966 | 0.17 | -0.5 | |
2,033,260 | + | ECD_01966 | 0.35 | +0.5 | |
2,033,261 | - | ECD_01966 | 0.35 | -0.3 |
Or see this region's nucleotide sequence