Strain Fitness in Escherichia coli BL21 around ECD_01901
Experiment: Mixed culture, Halobacteriovorax-1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Mixed culture, Halobacteriovorax-1 |
---|---|---|---|---|---|
remove | |||||
1,968,861 | - | ECD_01900 | 0.30 | +0.5 | |
1,969,146 | - | ECD_01900 | 0.56 | -0.6 | |
1,969,146 | - | ECD_01900 | 0.56 | +0.1 | |
1,969,280 | + | ECD_01900 | 0.69 | +1.0 | |
1,969,421 | - | ECD_01900 | 0.82 | -0.6 | |
1,969,589 | - | +0.8 | |||
1,969,790 | - | ECD_01901 | 0.22 | -0.7 | |
1,969,898 | + | ECD_01901 | 0.36 | +0.5 | |
1,969,899 | - | ECD_01901 | 0.37 | +0.5 | |
1,969,899 | - | ECD_01901 | 0.37 | +0.3 | |
1,970,009 | - | ECD_01901 | 0.51 | +0.2 | |
1,970,086 | - | ECD_01901 | 0.62 | -0.5 | |
1,970,170 | - | ECD_01901 | 0.73 | +1.2 | |
1,970,246 | - | ECD_01901 | 0.83 | -0.9 | |
1,970,518 | - | ECD_01902 | 0.28 | +0.3 |
Or see this region's nucleotide sequence