Strain Fitness in Escherichia coli BL21 around ECD_00948
Experiment: Mixed culture, Halobacteriovorax-1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Mixed culture, Halobacteriovorax-1 |
---|---|---|---|---|---|
remove | |||||
1,008,073 | + | ECD_00946 | 0.17 | -0.1 | |
1,008,297 | + | ECD_00946 | 0.59 | -0.4 | |
1,008,448 | + | ECD_00946 | 0.87 | -0.1 | |
1,008,448 | + | ECD_00946 | 0.87 | +0.2 | |
1,008,586 | + | ECD_00947 | 0.11 | +0.3 | |
1,008,635 | + | ECD_00947 | 0.21 | +0.3 | |
1,008,635 | + | ECD_00947 | 0.21 | -0.2 | |
1,008,932 | - | ECD_00947 | 0.78 | +0.1 | |
1,009,044 | + | +0.1 | |||
1,009,209 | + | ECD_00948 | 0.24 | +0.4 | |
1,009,293 | + | ECD_00948 | 0.36 | -0.7 | |
1,009,505 | - | ECD_00948 | 0.66 | +0.5 | |
1,009,541 | + | ECD_00948 | 0.71 | -0.4 | |
1,009,592 | + | ECD_00948 | 0.78 | -0.6 | |
1,010,250 | + | ECD_00949 | 0.39 | -2.6 | |
1,010,487 | + | ECD_00949 | 0.62 | -1.2 | |
1,010,570 | + | ECD_00949 | 0.71 | -2.1 |
Or see this region's nucleotide sequence