Experiment: Mixed culture, Halobacteriovorax-1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_00748 and ECD_00749 are separated by 21 nucleotides ECD_00749 and ECD_00750 are separated by 2 nucleotides ECD_00750 and ECD_00751 overlap by 8 nucleotides ECD_00751 and ECD_00752 are separated by 1 nucleotides
ECD_00748: ECD_00748 - molybdopterin biosynthesis protein A, at 801,037 to 802,026
_00748
ECD_00749: ECD_00749 - inactive molybdopterin adenylyltransferase, at 802,048 to 802,560
_00749
ECD_00750: ECD_00750 - molybdopterin biosynthesis, protein C, at 802,563 to 803,048
_00750
ECD_00751: ECD_00751 - molybdopterin synthase, small subunit, at 803,041 to 803,286
_00751
ECD_00752: ECD_00752 - molybdopterin synthase, large subunit, at 803,288 to 803,740
_00752
Position (kb) 802
803 Strain fitness (log2 ratio) -1
0
1 at 801.070 kb on - strand at 801.079 kb on + strand at 801.109 kb on - strand at 801.124 kb on + strand at 801.343 kb on + strand, within ECD_00748 at 801.388 kb on - strand, within ECD_00748 at 801.388 kb on - strand, within ECD_00748 at 801.412 kb on - strand, within ECD_00748 at 801.439 kb on - strand, within ECD_00748 at 801.648 kb on + strand, within ECD_00748 at 801.649 kb on - strand, within ECD_00748 at 801.686 kb on + strand, within ECD_00748 at 802.012 kb on + strand at 802.013 kb on - strand at 802.216 kb on - strand, within ECD_00749 at 802.257 kb on - strand, within ECD_00749 at 802.480 kb on - strand, within ECD_00749 at 802.558 kb on + strand at 802.562 kb on + strand at 802.562 kb on + strand at 802.694 kb on + strand, within ECD_00750 at 802.694 kb on + strand, within ECD_00750 at 802.723 kb on + strand, within ECD_00750 at 802.857 kb on - strand, within ECD_00750 at 802.867 kb on + strand, within ECD_00750 at 802.941 kb on + strand, within ECD_00750 at 802.942 kb on - strand, within ECD_00750 at 803.284 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Mixed culture, Halobacteriovorax-1 remove 801,070 - +0.1 801,079 + -0.5 801,109 - +0.8 801,124 + -0.2 801,343 + ECD_00748 0.31 -0.7 801,388 - ECD_00748 0.35 +1.2 801,388 - ECD_00748 0.35 +1.2 801,412 - ECD_00748 0.38 -0.5 801,439 - ECD_00748 0.41 +0.0 801,648 + ECD_00748 0.62 +0.2 801,649 - ECD_00748 0.62 -0.3 801,686 + ECD_00748 0.66 +0.8 802,012 + -0.4 802,013 - -0.7 802,216 - ECD_00749 0.33 +0.5 802,257 - ECD_00749 0.41 -0.6 802,480 - ECD_00749 0.84 -0.5 802,558 + -0.4 802,562 + +1.2 802,562 + +0.7 802,694 + ECD_00750 0.27 +0.1 802,694 + ECD_00750 0.27 +0.3 802,723 + ECD_00750 0.33 -0.3 802,857 - ECD_00750 0.60 +0.1 802,867 + ECD_00750 0.63 +0.3 802,941 + ECD_00750 0.78 -0.0 802,942 - ECD_00750 0.78 +0.0 803,284 + +0.7
Or see this region's nucleotide sequence