Experiment: Kang_ML4_MIT diversity barseq
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0890 and B158DRAFT_0891 are separated by 248 nucleotides B158DRAFT_0891 and B158DRAFT_0892 are separated by 40 nucleotides
B158DRAFT_0890: B158DRAFT_0890 - Phosphate-selective porin, at 909,902 to 911,038
_0890
B158DRAFT_0891: B158DRAFT_0891 - ABC-type uncharacterized transport system, permease component, at 911,287 to 913,527
_0891
B158DRAFT_0892: B158DRAFT_0892 - phosphate ABC transporter membrane protein 2, PhoT family (TC 3.A.1.7.1), at 913,568 to 915,175
_0892
Position (kb) 911
912
913
914 Strain fitness (log2 ratio) -1
0
1
2
3
4 at 910.456 kb on + strand, within B158DRAFT_0890 at 910.731 kb on + strand, within B158DRAFT_0890 at 910.731 kb on + strand, within B158DRAFT_0890 at 910.912 kb on - strand, within B158DRAFT_0890 at 910.997 kb on + strand at 911.328 kb on - strand at 911.398 kb on - strand at 911.398 kb on - strand at 911.537 kb on - strand, within B158DRAFT_0891 at 911.807 kb on + strand, within B158DRAFT_0891 at 911.807 kb on + strand, within B158DRAFT_0891 at 911.807 kb on + strand, within B158DRAFT_0891 at 911.815 kb on - strand, within B158DRAFT_0891 at 911.815 kb on - strand, within B158DRAFT_0891 at 911.815 kb on - strand, within B158DRAFT_0891 at 911.815 kb on - strand, within B158DRAFT_0891 at 911.815 kb on - strand, within B158DRAFT_0891 at 912.165 kb on - strand, within B158DRAFT_0891 at 912.207 kb on - strand, within B158DRAFT_0891 at 912.207 kb on - strand, within B158DRAFT_0891 at 912.230 kb on + strand, within B158DRAFT_0891 at 912.230 kb on + strand, within B158DRAFT_0891 at 912.238 kb on - strand, within B158DRAFT_0891 at 912.319 kb on - strand, within B158DRAFT_0891 at 912.530 kb on + strand, within B158DRAFT_0891 at 912.895 kb on - strand, within B158DRAFT_0891 at 913.058 kb on + strand, within B158DRAFT_0891 at 913.066 kb on - strand, within B158DRAFT_0891 at 913.066 kb on - strand, within B158DRAFT_0891 at 913.066 kb on - strand, within B158DRAFT_0891 at 913.076 kb on + strand, within B158DRAFT_0891 at 913.081 kb on - strand, within B158DRAFT_0891 at 913.207 kb on + strand, within B158DRAFT_0891 at 913.207 kb on + strand, within B158DRAFT_0891 at 913.207 kb on + strand, within B158DRAFT_0891 at 913.438 kb on + strand at 913.439 kb on + strand at 913.690 kb on + strand at 913.934 kb on + strand, within B158DRAFT_0892 at 914.097 kb on + strand, within B158DRAFT_0892 at 914.138 kb on + strand, within B158DRAFT_0892 at 914.146 kb on - strand, within B158DRAFT_0892 at 914.149 kb on + strand, within B158DRAFT_0892 at 914.230 kb on + strand, within B158DRAFT_0892 at 914.238 kb on - strand, within B158DRAFT_0892
Per-strain Table
Position Strand Gene LocusTag Fraction Kang_ML4_MIT diversity barseq remove 910,456 + B158DRAFT_0890 0.49 +4.0 910,731 + B158DRAFT_0890 0.73 +3.0 910,731 + B158DRAFT_0890 0.73 +2.5 910,912 - B158DRAFT_0890 0.89 +3.2 910,997 + +1.5 911,328 - +1.4 911,398 - +1.5 911,398 - +0.9 911,537 - B158DRAFT_0891 0.11 +2.9 911,807 + B158DRAFT_0891 0.23 +0.9 911,807 + B158DRAFT_0891 0.23 +0.1 911,807 + B158DRAFT_0891 0.23 +0.5 911,815 - B158DRAFT_0891 0.24 +2.5 911,815 - B158DRAFT_0891 0.24 +0.3 911,815 - B158DRAFT_0891 0.24 +0.5 911,815 - B158DRAFT_0891 0.24 +1.2 911,815 - B158DRAFT_0891 0.24 +0.1 912,165 - B158DRAFT_0891 0.39 +1.6 912,207 - B158DRAFT_0891 0.41 +1.9 912,207 - B158DRAFT_0891 0.41 -0.5 912,230 + B158DRAFT_0891 0.42 +2.0 912,230 + B158DRAFT_0891 0.42 +1.2 912,238 - B158DRAFT_0891 0.42 +1.1 912,319 - B158DRAFT_0891 0.46 +1.2 912,530 + B158DRAFT_0891 0.55 +1.5 912,895 - B158DRAFT_0891 0.72 -0.0 913,058 + B158DRAFT_0891 0.79 +0.5 913,066 - B158DRAFT_0891 0.79 +0.1 913,066 - B158DRAFT_0891 0.79 +2.5 913,066 - B158DRAFT_0891 0.79 +0.7 913,076 + B158DRAFT_0891 0.80 +1.5 913,081 - B158DRAFT_0891 0.80 +2.1 913,207 + B158DRAFT_0891 0.86 +1.6 913,207 + B158DRAFT_0891 0.86 +0.9 913,207 + B158DRAFT_0891 0.86 +1.5 913,438 + +2.2 913,439 + +0.2 913,690 + +0.8 913,934 + B158DRAFT_0892 0.23 +1.7 914,097 + B158DRAFT_0892 0.33 +2.5 914,138 + B158DRAFT_0892 0.35 +0.5 914,146 - B158DRAFT_0892 0.36 +0.9 914,149 + B158DRAFT_0892 0.36 +0.9 914,230 + B158DRAFT_0892 0.41 +0.3 914,238 - B158DRAFT_0892 0.42 -0.1
Or see this region's nucleotide sequence