Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0864

Experiment: Kang_ML4_MIT diversity barseq

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0862 and B158DRAFT_0863 are separated by 113 nucleotidesB158DRAFT_0863 and B158DRAFT_0864 are separated by 107 nucleotidesB158DRAFT_0864 and B158DRAFT_0865 are separated by 24 nucleotides B158DRAFT_0862: B158DRAFT_0862 - Zinc-binding domain of primase-helicase., at 880,848 to 881,009 _0862 B158DRAFT_0863: B158DRAFT_0863 - Predicted amidophosphoribosyltransferases, at 881,123 to 881,830 _0863 B158DRAFT_0864: B158DRAFT_0864 - biotin synthase (EC 2.8.1.6), at 881,938 to 883,032 _0864 B158DRAFT_0865: B158DRAFT_0865 - 8-amino-7-oxononanoate synthase, at 883,057 to 884,226 _0865 Position (kb) 881 882 883 884Strain fitness (log2 ratio) -3 -2 -1 0 1at 880.981 kb on + strand, within B158DRAFT_0862at 880.981 kb on + strand, within B158DRAFT_0862at 880.981 kb on + strand, within B158DRAFT_0862at 880.981 kb on + strand, within B158DRAFT_0862at 880.981 kb on + strand, within B158DRAFT_0862at 880.989 kb on - strand, within B158DRAFT_0862at 880.989 kb on - strand, within B158DRAFT_0862at 880.989 kb on - strand, within B158DRAFT_0862at 881.007 kb on + strandat 881.007 kb on + strandat 881.007 kb on + strandat 881.007 kb on + strandat 881.015 kb on - strandat 881.015 kb on - strandat 881.015 kb on - strandat 881.015 kb on - strandat 881.083 kb on + strandat 881.121 kb on + strandat 881.121 kb on + strandat 881.121 kb on + strandat 881.121 kb on + strandat 881.121 kb on + strandat 881.121 kb on + strandat 881.122 kb on - strandat 881.126 kb on + strandat 881.126 kb on + strandat 881.127 kb on + strandat 881.129 kb on - strandat 881.129 kb on - strandat 881.129 kb on - strandat 881.134 kb on - strandat 881.134 kb on - strandat 881.134 kb on - strandat 881.149 kb on - strandat 881.154 kb on - strandat 881.167 kb on + strandat 881.167 kb on + strandat 881.167 kb on + strandat 881.167 kb on + strandat 881.179 kb on + strandat 881.187 kb on - strandat 881.187 kb on - strandat 881.218 kb on - strand, within B158DRAFT_0863at 881.220 kb on + strand, within B158DRAFT_0863at 881.271 kb on + strand, within B158DRAFT_0863at 881.288 kb on + strand, within B158DRAFT_0863at 881.290 kb on + strand, within B158DRAFT_0863at 881.290 kb on + strand, within B158DRAFT_0863at 881.296 kb on - strand, within B158DRAFT_0863at 881.296 kb on - strand, within B158DRAFT_0863at 881.339 kb on - strand, within B158DRAFT_0863at 881.339 kb on - strand, within B158DRAFT_0863at 881.339 kb on - strand, within B158DRAFT_0863at 881.375 kb on + strand, within B158DRAFT_0863at 881.375 kb on + strand, within B158DRAFT_0863at 881.383 kb on - strand, within B158DRAFT_0863at 881.383 kb on - strand, within B158DRAFT_0863at 881.404 kb on + strand, within B158DRAFT_0863at 881.404 kb on + strand, within B158DRAFT_0863at 881.404 kb on + strand, within B158DRAFT_0863at 881.404 kb on + strand, within B158DRAFT_0863at 881.412 kb on - strand, within B158DRAFT_0863at 881.412 kb on - strand, within B158DRAFT_0863at 881.412 kb on - strand, within B158DRAFT_0863at 881.412 kb on - strand, within B158DRAFT_0863at 881.412 kb on - strand, within B158DRAFT_0863at 881.412 kb on - strand, within B158DRAFT_0863at 881.412 kb on - strand, within B158DRAFT_0863at 881.419 kb on + strand, within B158DRAFT_0863at 881.419 kb on + strand, within B158DRAFT_0863at 881.419 kb on + strand, within B158DRAFT_0863at 881.427 kb on - strand, within B158DRAFT_0863at 881.427 kb on - strand, within B158DRAFT_0863at 881.600 kb on + strand, within B158DRAFT_0863at 881.634 kb on - strand, within B158DRAFT_0863at 881.657 kb on - strand, within B158DRAFT_0863at 881.693 kb on + strand, within B158DRAFT_0863at 881.693 kb on + strand, within B158DRAFT_0863at 881.693 kb on + strand, within B158DRAFT_0863at 881.693 kb on + strand, within B158DRAFT_0863at 881.693 kb on + strand, within B158DRAFT_0863at 881.693 kb on + strand, within B158DRAFT_0863at 881.693 kb on + strand, within B158DRAFT_0863at 881.693 kb on + strand, within B158DRAFT_0863at 881.698 kb on + strand, within B158DRAFT_0863at 881.701 kb on - strand, within B158DRAFT_0863at 881.701 kb on - strand, within B158DRAFT_0863at 881.701 kb on - strand, within B158DRAFT_0863at 881.701 kb on - strand, within B158DRAFT_0863at 881.701 kb on - strand, within B158DRAFT_0863at 881.701 kb on - strand, within B158DRAFT_0863at 881.701 kb on - strand, within B158DRAFT_0863at 881.713 kb on - strand, within B158DRAFT_0863at 881.715 kb on + strand, within B158DRAFT_0863at 881.783 kb on + strandat 881.790 kb on + strandat 881.918 kb on + strandat 882.942 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Kang_ML4_MIT diversity barseq
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880,981 + B158DRAFT_0862 0.82 -0.2
880,981 + B158DRAFT_0862 0.82 -0.5
880,981 + B158DRAFT_0862 0.82 -0.4
880,981 + B158DRAFT_0862 0.82 -0.2
880,981 + B158DRAFT_0862 0.82 -0.5
880,989 - B158DRAFT_0862 0.87 +0.4
880,989 - B158DRAFT_0862 0.87 -0.4
880,989 - B158DRAFT_0862 0.87 +0.3
881,007 + -0.2
881,007 + -0.3
881,007 + -0.2
881,007 + +0.3
881,015 - -0.1
881,015 - -0.4
881,015 - +0.1
881,015 - -1.1
881,083 + +0.6
881,121 + +0.8
881,121 + -0.3
881,121 + -0.6
881,121 + +0.2
881,121 + -0.2
881,121 + -0.1
881,122 - -1.9
881,126 + -0.4
881,126 + +0.2
881,127 + +0.2
881,129 - -0.9
881,129 - +0.3
881,129 - -0.8
881,134 - -0.2
881,134 - -0.3
881,134 - -0.2
881,149 - -0.3
881,154 - +0.0
881,167 + +0.1
881,167 + +0.9
881,167 + +1.2
881,167 + +0.9
881,179 + -0.2
881,187 - +0.1
881,187 - -0.2
881,218 - B158DRAFT_0863 0.13 +0.3
881,220 + B158DRAFT_0863 0.14 +0.4
881,271 + B158DRAFT_0863 0.21 -0.0
881,288 + B158DRAFT_0863 0.23 -1.1
881,290 + B158DRAFT_0863 0.24 -0.1
881,290 + B158DRAFT_0863 0.24 -1.0
881,296 - B158DRAFT_0863 0.24 +0.1
881,296 - B158DRAFT_0863 0.24 +0.9
881,339 - B158DRAFT_0863 0.31 +0.9
881,339 - B158DRAFT_0863 0.31 -0.2
881,339 - B158DRAFT_0863 0.31 -0.2
881,375 + B158DRAFT_0863 0.36 -0.7
881,375 + B158DRAFT_0863 0.36 +0.2
881,383 - B158DRAFT_0863 0.37 -0.5
881,383 - B158DRAFT_0863 0.37 -2.8
881,404 + B158DRAFT_0863 0.40 -0.1
881,404 + B158DRAFT_0863 0.40 -0.6
881,404 + B158DRAFT_0863 0.40 -0.1
881,404 + B158DRAFT_0863 0.40 +0.3
881,412 - B158DRAFT_0863 0.41 -0.3
881,412 - B158DRAFT_0863 0.41 +0.3
881,412 - B158DRAFT_0863 0.41 -0.6
881,412 - B158DRAFT_0863 0.41 -0.9
881,412 - B158DRAFT_0863 0.41 -0.2
881,412 - B158DRAFT_0863 0.41 +0.4
881,412 - B158DRAFT_0863 0.41 -0.2
881,419 + B158DRAFT_0863 0.42 +0.1
881,419 + B158DRAFT_0863 0.42 -0.6
881,419 + B158DRAFT_0863 0.42 -0.1
881,427 - B158DRAFT_0863 0.43 +0.3
881,427 - B158DRAFT_0863 0.43 -0.5
881,600 + B158DRAFT_0863 0.67 -0.7
881,634 - B158DRAFT_0863 0.72 +0.5
881,657 - B158DRAFT_0863 0.75 -0.1
881,693 + B158DRAFT_0863 0.81 -0.8
881,693 + B158DRAFT_0863 0.81 +0.5
881,693 + B158DRAFT_0863 0.81 +0.1
881,693 + B158DRAFT_0863 0.81 -1.5
881,693 + B158DRAFT_0863 0.81 +0.3
881,693 + B158DRAFT_0863 0.81 +0.1
881,693 + B158DRAFT_0863 0.81 -1.0
881,693 + B158DRAFT_0863 0.81 +0.2
881,698 + B158DRAFT_0863 0.81 -0.8
881,701 - B158DRAFT_0863 0.82 -0.7
881,701 - B158DRAFT_0863 0.82 -2.1
881,701 - B158DRAFT_0863 0.82 -0.3
881,701 - B158DRAFT_0863 0.82 +0.2
881,701 - B158DRAFT_0863 0.82 -0.4
881,701 - B158DRAFT_0863 0.82 -0.9
881,701 - B158DRAFT_0863 0.82 -0.9
881,713 - B158DRAFT_0863 0.83 -0.3
881,715 + B158DRAFT_0863 0.84 -0.7
881,783 + +0.3
881,790 + -1.0
881,918 + -0.1
882,942 + +0.4

Or see this region's nucleotide sequence