Strain Fitness in Escherichia coli BW25113 around b4474

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,499,395	+	yhfN	b3371	0.10	+0.9
3,499,398	+	yhfN	b3371	0.11	+2.0
3,499,398	+	yhfN	b3371	0.11	-1.0
3,499,401	-	yhfN	b3371	0.11	+0.6
3,499,462	-	yhfN	b3371	0.17	-0.2
3,499,508	+	yhfN	b3371	0.21	-2.0
3,499,508	+	yhfN	b3371	0.21	-2.4
3,499,532	+	yhfN	b3371	0.24	-1.4
3,499,645	-	yhfN	b3371	0.35	-0.7
3,499,664	+	yhfN	b3371	0.37	-0.3
3,499,675	+	yhfN	b3371	0.38	+0.3
3,499,762	-	yhfN	b3371	0.46	-0.0
3,499,762	-	yhfN	b3371	0.46	+0.2
3,499,767	+	yhfN	b3371	0.47	+0.1
3,499,767	+	yhfN	b3371	0.47	-0.4
3,499,775	-	yhfN	b3371	0.47	+0.4
3,499,899	-	yhfN	b3371	0.60	+0.0
3,499,914	-	yhfN	b3371	0.61	-0.6
3,499,929	-	yhfN	b3371	0.62	-0.7
3,499,935	-	yhfN	b3371	0.63	+0.4
3,499,950	+	yhfN	b3371	0.65	-0.7
3,499,982	+	yhfN	b3371	0.68	-0.6
3,500,052	+	yhfN	b3371	0.74	+0.3
3,500,136	-	yhfN	b3371	0.83	+0.2
3,500,192	+	yhfN	b3371	0.88	-0.2
3,500,237	-				-0.6
3,500,237	-				-0.6
3,500,239	+				+0.4
3,500,245	-				-0.1
3,500,318	+				+0.6
3,500,318	+				-0.3
3,500,364	+				+0.3
3,500,400	+				+0.3
3,500,437	+				+0.9
3,500,445	-	frlC	b4474	0.10	+0.3
3,500,476	-	frlC	b4474	0.14	+0.5
3,500,548	+	frlC	b4474	0.22	-0.3
3,500,548	+	frlC	b4474	0.22	+0.7
3,500,569	+	frlC	b4474	0.25	-0.0
3,500,588	+	frlC	b4474	0.27	+0.7
3,500,591	-	frlC	b4474	0.28	-1.6
3,500,595	-	frlC	b4474	0.28	+0.2
3,500,605	+	frlC	b4474	0.29	-0.0
3,500,605	+	frlC	b4474	0.29	+0.8
3,500,625	-	frlC	b4474	0.32	-0.6
3,500,625	-	frlC	b4474	0.32	-0.6
3,500,649	+	frlC	b4474	0.35	-0.6
3,500,680	-	frlC	b4474	0.38	-1.0
3,500,711	-	frlC	b4474	0.42	-0.3
3,500,718	+	frlC	b4474	0.43	-0.6
3,500,718	+	frlC	b4474	0.43	-0.1
3,500,726	-	frlC	b4474	0.44	-0.3
3,500,739	+	frlC	b4474	0.45	-0.6
3,500,763	+	frlC	b4474	0.48	-0.4
3,500,763	+	frlC	b4474	0.48	-0.5
3,500,763	+	frlC	b4474	0.48	-0.0
3,500,763	+	frlC	b4474	0.48	-0.6
3,500,767	-	frlC	b4474	0.49	+0.1
3,500,789	+	frlC	b4474	0.51	+0.1
3,500,815	-	frlC	b4474	0.55	-0.1
3,500,830	+	frlC	b4474	0.56	+0.6
3,500,833	+	frlC	b4474	0.57	+0.4
3,500,861	+	frlC	b4474	0.60	+0.7
3,500,861	-	frlC	b4474	0.60	+0.8
3,500,861	-	frlC	b4474	0.60	+0.3
3,500,899	+	frlC	b4474	0.65	+0.6
3,501,008	-	frlC	b4474	0.78	+0.3
3,501,020	-	frlC	b4474	0.79	+0.0
3,501,028	-	frlC	b4474	0.80	-0.1
3,501,035	+	frlC	b4474	0.81	-0.9
3,501,035	+	frlC	b4474	0.81	+0.1
3,501,062	+	frlC	b4474	0.84	-0.7
3,501,062	+	frlC	b4474	0.84	+0.1
3,501,090	+	frlC	b4474	0.88	+1.4
3,501,098	-	frlC	b4474	0.89	-0.4
3,501,100	-	frlC	b4474	0.89	+2.1
3,501,105	+	frlC	b4474	0.89	-0.2
3,501,114	+				+0.2
3,501,114	+				+0.6
3,501,114	+				+2.2
3,501,123	-				-1.0
3,501,123	-				+0.7
3,501,125	+				-0.3
3,501,169	+				+0.4
3,501,169	+				-0.4
3,501,178	+				-0.4
3,501,239	+				+0.9
3,501,240	-				-0.8
3,501,284	+	frlD	b3374	0.12	+0.4
3,501,292	-	frlD	b3374	0.13	-1.1
3,501,330	+	frlD	b3374	0.18	+0.8
3,501,382	-	frlD	b3374	0.25	-0.8
3,501,410	+	frlD	b3374	0.28	-0.3
3,501,498	-	frlD	b3374	0.39	-0.4
3,501,498	-	frlD	b3374	0.39	+0.0
3,501,517	-	frlD	b3374	0.42	-0.5
3,501,522	-	frlD	b3374	0.42	+0.5
3,501,530	+	frlD	b3374	0.43	+0.7
3,501,530	+	frlD	b3374	0.43	+0.3
3,501,530	+	frlD	b3374	0.43	+0.8
3,501,530	+	frlD	b3374	0.43	-0.3
3,501,530	+	frlD	b3374	0.43	+0.3
3,501,536	-	frlD	b3374	0.44	+0.0
3,501,536	-	frlD	b3374	0.44	-0.2
3,501,536	-	frlD	b3374	0.44	+0.5
3,501,538	-	frlD	b3374	0.44	-0.2
3,501,548	-	frlD	b3374	0.46	-0.8
3,501,560	-	frlD	b3374	0.47	+0.5
3,501,801	+	frlD	b3374	0.78	+0.5
3,501,803	+	frlD	b3374	0.78	-1.5
3,501,962	-				+0.3
3,501,964	-				-1.8
3,501,975	+				+0.1
3,501,975	+				+0.5
3,501,980	+				-0.3
3,501,998	-				+1.1
3,501,998	-				-1.4
3,502,109	+				-1.0
3,502,115	-				-1.1
3,502,147	+				-0.6
3,502,157	+	yhfR	b3375	0.11	-0.2
3,502,161	-	yhfR	b3375	0.12	-0.0
3,502,175	-	yhfR	b3375	0.14	+0.8