Strain Fitness in Escherichia coli BW25113 around b2542

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,669,083	+	hcaC	b2540	0.48	-0.2
2,669,112	-	hcaC	b2540	0.57	-0.3
2,669,166	+	hcaC	b2540	0.74	+0.8
2,669,295	+				+0.1
2,669,442	-	hcaB	b2541	0.24	-1.3
2,669,469	-				+1.5
2,669,662	+	hcaB	b2541	0.51	+0.1
2,669,678	-	hcaB	b2541	0.53	+0.1
2,669,678	-	hcaB	b2541	0.53	-0.5
2,669,716	-	hcaB	b2541	0.58	-0.2
2,669,716	-	hcaB	b2541	0.58	+0.8
2,669,827	+	hcaB	b2541	0.71	-1.9
2,669,827	+	hcaB	b2541	0.71	+0.4
2,669,835	-	hcaB	b2541	0.72	+1.6
2,669,835	-	hcaB	b2541	0.72	+0.6
2,669,946	+	hcaB	b2541	0.86	+1.4
2,669,947	-	hcaB	b2541	0.86	+0.2
2,669,951	+	hcaB	b2541	0.87	+0.4
2,669,951	+	hcaB	b2541	0.87	-1.5
2,670,153	+				+0.0
2,670,199	+	hcaD	b2542	0.11	+0.1
2,670,427	-	hcaD	b2542	0.30	+0.3
2,670,427	-	hcaD	b2542	0.30	-0.7
2,670,447	+	hcaD	b2542	0.31	+0.3
2,670,450	-	hcaD	b2542	0.32	+1.5
2,670,450	-	hcaD	b2542	0.32	-1.1
2,670,576	-	hcaD	b2542	0.42	+0.6
2,670,576	-	hcaD	b2542	0.42	+0.3
2,670,576	-	hcaD	b2542	0.42	-0.5
2,670,603	+	hcaD	b2542	0.44	+0.4
2,670,836	-	hcaD	b2542	0.64	-0.3
2,670,927	-	hcaD	b2542	0.71	+0.0
2,670,994	-	hcaD	b2542	0.77	-0.3
2,670,994	-	hcaD	b2542	0.77	+1.4
2,671,037	+	hcaD	b2542	0.80	-0.5
2,671,203	+				+1.1
2,671,315	+				+0.5
2,671,315	+				+0.1
2,671,315	+				+0.4
2,671,323	-				+0.6
2,671,373	-				+0.2
2,671,373	-				-0.3
2,671,494	+	yphA	b2543	0.30	-0.2
2,671,494	+	yphA	b2543	0.30	+0.3
2,671,496	+	yphA	b2543	0.30	+0.3
2,671,497	-	yphA	b2543	0.30	+0.1
2,671,502	-	yphA	b2543	0.32	+0.3
2,671,502	-	yphA	b2543	0.32	+0.9
2,671,509	+	yphA	b2543	0.33	+0.9
2,671,603	+	yphA	b2543	0.56	-0.2
2,671,641	-	yphA	b2543	0.65	-0.3
2,671,645	-	yphA	b2543	0.65	+1.1
2,671,713	+	yphA	b2543	0.82	+0.5
2,671,736	+	yphA	b2543	0.87	-0.2
2,671,736	+	yphA	b2543	0.87	+1.0
2,671,789	+				+0.7
2,671,890	-				-0.1
2,671,959	-	yphB	b2544	0.14	-0.7
2,672,031	-	yphB	b2544	0.22	+1.2
2,672,031	-	yphB	b2544	0.22	-0.2
2,672,053	+	yphB	b2544	0.25	-0.0
2,672,081	+	yphB	b2544	0.28	+0.1
2,672,084	-	yphB	b2544	0.28	+0.1
2,672,165	-	yphB	b2544	0.37	+0.7
2,672,165	-	yphB	b2544	0.37	-0.2