Experiment: LB_plus_SM_buffer with 6F2_phage 0.1875 MOI
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2608 and GFF2609 overlap by 1 nucleotides GFF2609 and GFF2610 are separated by 46 nucleotides GFF2610 and GFF2611 are separated by 11 nucleotides GFF2611 and GFF2612 are separated by 204 nucleotides
GFF2608 - Putative arylsulfatase regulatory protein, at 132,179 to 132,976
GFF2608
GFF2609 - 'Aminoglycoside 6'-N-acetyltransferase' transl_table=11, at 132,976 to 133,413
GFF2609
GFF2610 - Lactate 2-monooxygenase (EC 1.13.12.4), at 133,460 to 134,662
GFF2610
GFF2611 - FIG01200701: possible membrane protein, at 134,674 to 135,240
GFF2611
GFF2612 - Glucans biosynthesis protein D precursor, at 135,445 to 137,064
GFF2612
Position (kb) 133
134
135 Strain fitness (log2 ratio) -1
0
1 at 132.609 kb on - strand, within GFF2608 at 132.609 kb on - strand, within GFF2608 at 132.703 kb on + strand, within GFF2608 at 132.704 kb on - strand, within GFF2608 at 132.748 kb on + strand, within GFF2608 at 132.749 kb on - strand, within GFF2608 at 132.781 kb on + strand, within GFF2608 at 132.782 kb on - strand, within GFF2608 at 132.804 kb on + strand, within GFF2608 at 132.837 kb on + strand, within GFF2608 at 132.838 kb on - strand, within GFF2608 at 132.871 kb on + strand, within GFF2608 at 132.871 kb on + strand, within GFF2608 at 132.884 kb on - strand, within GFF2608 at 133.441 kb on - strand at 133.458 kb on + strand at 133.604 kb on - strand, within GFF2610 at 133.793 kb on - strand, within GFF2610 at 133.886 kb on - strand, within GFF2610 at 133.892 kb on + strand, within GFF2610 at 133.893 kb on - strand, within GFF2610 at 133.893 kb on - strand, within GFF2610 at 134.082 kb on - strand, within GFF2610 at 134.595 kb on + strand at 134.706 kb on + strand at 135.279 kb on + strand at 135.507 kb on - strand at 135.507 kb on - strand at 135.552 kb on + strand at 135.552 kb on + strand at 135.552 kb on + strand at 135.552 kb on + strand at 135.553 kb on - strand at 135.553 kb on - strand at 135.606 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB_plus_SM_buffer with 6F2_phage 0.1875 MOI remove 132,609 - GFF2608 0.54 -0.6 132,609 - GFF2608 0.54 +1.1 132,703 + GFF2608 0.66 +0.4 132,704 - GFF2608 0.66 -0.4 132,748 + GFF2608 0.71 -0.0 132,749 - GFF2608 0.71 -0.5 132,781 + GFF2608 0.75 -1.1 132,782 - GFF2608 0.76 -0.3 132,804 + GFF2608 0.78 +0.8 132,837 + GFF2608 0.82 -0.1 132,838 - GFF2608 0.83 +0.7 132,871 + GFF2608 0.87 +0.8 132,871 + GFF2608 0.87 +0.9 132,884 - GFF2608 0.88 -0.4 133,441 - -0.0 133,458 + +0.1 133,604 - GFF2610 0.12 +1.4 133,793 - GFF2610 0.28 -0.0 133,886 - GFF2610 0.35 -0.0 133,892 + GFF2610 0.36 +0.3 133,893 - GFF2610 0.36 +0.9 133,893 - GFF2610 0.36 -0.4 134,082 - GFF2610 0.52 +1.7 134,595 + +0.5 134,706 + +0.8 135,279 + -0.1 135,507 - +0.3 135,507 - -0.2 135,552 + +0.0 135,552 + +0.6 135,552 + +0.2 135,552 + +0.0 135,553 - +1.7 135,553 - -0.0 135,606 + -0.1
Or see this region's nucleotide sequence