Experiment: Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS27425 and ABID97_RS27430 are separated by 112 nucleotides ABID97_RS27430 and ABID97_RS27435 are separated by 98 nucleotides
ABID97_RS27425: ABID97_RS27425 - tannase/feruloyl esterase family alpha/beta hydrolase, at 401,032 to 402,741
_RS27425
ABID97_RS27430: ABID97_RS27430 - acetate--CoA ligase, at 402,854 to 404,776
_RS27430
ABID97_RS27435: ABID97_RS27435 - acyltransferase domain-containing protein, at 404,875 to 405,783
_RS27435
Position (kb) 402
403
404
405 Strain fitness (log2 ratio) -1
0
1
2
3
4 at 401.867 kb on + strand, within ABID97_RS27425 at 401.867 kb on + strand, within ABID97_RS27425 at 401.868 kb on - strand, within ABID97_RS27425 at 401.868 kb on - strand, within ABID97_RS27425 at 401.868 kb on - strand, within ABID97_RS27425 at 402.114 kb on - strand, within ABID97_RS27425 at 402.116 kb on + strand, within ABID97_RS27425 at 402.116 kb on + strand, within ABID97_RS27425 at 402.116 kb on + strand, within ABID97_RS27425 at 402.141 kb on - strand, within ABID97_RS27425 at 402.143 kb on + strand, within ABID97_RS27425 at 402.296 kb on + strand, within ABID97_RS27425 at 403.276 kb on - strand, within ABID97_RS27430 at 403.317 kb on + strand, within ABID97_RS27430 at 403.318 kb on - strand, within ABID97_RS27430 at 403.318 kb on - strand, within ABID97_RS27430 at 403.318 kb on - strand, within ABID97_RS27430 at 403.318 kb on - strand, within ABID97_RS27430 at 403.345 kb on - strand, within ABID97_RS27430 at 403.345 kb on - strand, within ABID97_RS27430 at 403.866 kb on + strand, within ABID97_RS27430 at 403.875 kb on + strand, within ABID97_RS27430 at 403.876 kb on - strand, within ABID97_RS27430 at 403.876 kb on - strand, within ABID97_RS27430 at 403.876 kb on - strand, within ABID97_RS27430 at 403.876 kb on - strand, within ABID97_RS27430 at 403.876 kb on - strand, within ABID97_RS27430 at 404.407 kb on - strand, within ABID97_RS27430 at 404.407 kb on - strand, within ABID97_RS27430 at 404.491 kb on - strand, within ABID97_RS27430 at 404.743 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days remove 401,867 + ABID97_RS27425 0.49 +0.9 401,867 + ABID97_RS27425 0.49 -0.2 401,868 - ABID97_RS27425 0.49 -0.7 401,868 - ABID97_RS27425 0.49 +0.0 401,868 - ABID97_RS27425 0.49 +0.0 402,114 - ABID97_RS27425 0.63 -0.2 402,116 + ABID97_RS27425 0.63 +2.2 402,116 + ABID97_RS27425 0.63 +0.2 402,116 + ABID97_RS27425 0.63 +0.6 402,141 - ABID97_RS27425 0.65 +1.0 402,143 + ABID97_RS27425 0.65 +0.2 402,296 + ABID97_RS27425 0.74 +0.6 403,276 - ABID97_RS27430 0.22 +4.0 403,317 + ABID97_RS27430 0.24 +0.7 403,318 - ABID97_RS27430 0.24 -1.4 403,318 - ABID97_RS27430 0.24 -0.3 403,318 - ABID97_RS27430 0.24 +0.0 403,318 - ABID97_RS27430 0.24 +1.5 403,345 - ABID97_RS27430 0.26 +0.9 403,345 - ABID97_RS27430 0.26 +1.6 403,866 + ABID97_RS27430 0.53 -1.3 403,875 + ABID97_RS27430 0.53 +0.6 403,876 - ABID97_RS27430 0.53 -1.7 403,876 - ABID97_RS27430 0.53 +0.7 403,876 - ABID97_RS27430 0.53 -1.0 403,876 - ABID97_RS27430 0.53 -0.4 403,876 - ABID97_RS27430 0.53 +1.3 404,407 - ABID97_RS27430 0.81 +0.4 404,407 - ABID97_RS27430 0.81 +0.1 404,491 - ABID97_RS27430 0.85 +0.3 404,743 - -0.3
Or see this region's nucleotide sequence