Strain Fitness in Escherichia coli BW25113 around b2393
Experiment: undecene 2.5 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | undecene 2.5 vol% |
---|---|---|---|---|---|
remove | |||||
2,510,130 | + | mntH | b2392 | 0.52 | -0.9 |
2,510,130 | + | mntH | b2392 | 0.52 | -2.7 |
2,510,198 | + | mntH | b2392 | 0.57 | -4.0 |
2,510,243 | + | mntH | b2392 | 0.61 | -2.8 |
2,510,243 | + | mntH | b2392 | 0.61 | -3.7 |
2,510,251 | - | mntH | b2392 | 0.61 | -4.6 |
2,510,435 | - | mntH | b2392 | 0.76 | -0.9 |
2,510,454 | - | mntH | b2392 | 0.78 | -1.5 |
2,510,533 | - | mntH | b2392 | 0.84 | -3.8 |
2,510,595 | - | mntH | b2392 | 0.89 | -4.9 |
2,510,607 | - | -4.4 | |||
2,510,643 | - | -1.2 | |||
2,510,708 | - | -0.7 | |||
2,510,892 | + | +0.0 | |||
2,510,921 | - | +1.4 | |||
2,510,921 | - | +1.1 | |||
2,510,972 | + | +0.4 | |||
2,510,972 | + | -0.5 | |||
2,510,974 | + | +0.9 | |||
2,510,974 | + | -0.2 | |||
2,510,974 | + | -0.1 | |||
2,511,001 | + | +0.9 | |||
2,511,001 | + | +0.3 | |||
2,511,024 | - | +0.6 | |||
2,511,061 | + | -0.1 | |||
2,511,061 | + | +0.3 | |||
2,511,118 | + | -0.3 | |||
2,511,169 | - | +0.9 | |||
2,511,250 | - | nupC | b2393 | 0.15 | +1.2 |
2,511,284 | + | nupC | b2393 | 0.18 | +0.9 |
2,511,365 | + | nupC | b2393 | 0.25 | -0.2 |
2,511,504 | + | nupC | b2393 | 0.37 | +0.3 |
2,511,504 | + | nupC | b2393 | 0.37 | +0.5 |
2,511,564 | + | nupC | b2393 | 0.42 | +0.5 |
2,511,623 | - | nupC | b2393 | 0.46 | +1.6 |
2,511,623 | - | nupC | b2393 | 0.46 | +0.8 |
2,511,690 | + | nupC | b2393 | 0.52 | +0.3 |
2,511,730 | - | nupC | b2393 | 0.55 | -0.4 |
2,511,918 | + | nupC | b2393 | 0.71 | +0.8 |
2,511,930 | - | nupC | b2393 | 0.72 | +0.6 |
2,511,993 | - | nupC | b2393 | 0.77 | -0.3 |
2,511,995 | + | nupC | b2393 | 0.77 | +0.2 |
2,511,995 | + | nupC | b2393 | 0.77 | +0.3 |
2,512,099 | - | nupC | b2393 | 0.86 | +0.9 |
2,512,099 | - | nupC | b2393 | 0.86 | +1.2 |
2,512,222 | - | +0.2 | |||
2,512,222 | - | +0.6 | |||
2,512,227 | - | +0.2 | |||
2,512,228 | + | -0.2 | |||
2,512,331 | - | +0.9 | |||
2,512,331 | - | +0.2 |
Or see this region's nucleotide sequence