Strain Fitness in Escherichia coli BW25113 around b1747
Experiment: undecene 2.5 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | undecene 2.5 vol% |
---|---|---|---|---|---|
remove | |||||
1,826,786 | + | astD | b1746 | 0.34 | +0.5 |
1,826,848 | - | astD | b1746 | 0.38 | -0.0 |
1,826,848 | - | astD | b1746 | 0.38 | +0.8 |
1,826,870 | - | astD | b1746 | 0.40 | +1.4 |
1,826,949 | - | astD | b1746 | 0.45 | -0.2 |
1,826,949 | - | astD | b1746 | 0.45 | -1.3 |
1,827,115 | + | astD | b1746 | 0.56 | -0.2 |
1,827,262 | - | astD | b1746 | 0.66 | +0.7 |
1,827,262 | - | astD | b1746 | 0.66 | -0.2 |
1,827,350 | - | astD | b1746 | 0.72 | +0.2 |
1,827,814 | + | -0.0 | |||
1,827,814 | + | +0.3 | |||
1,827,870 | - | astA | b1747 | 0.11 | +0.4 |
1,827,875 | + | astA | b1747 | 0.12 | -0.2 |
1,828,010 | - | astA | b1747 | 0.25 | +1.2 |
1,828,010 | - | astA | b1747 | 0.25 | +0.7 |
1,828,024 | - | astA | b1747 | 0.26 | +0.1 |
1,828,076 | - | astA | b1747 | 0.31 | -0.3 |
1,828,076 | - | astA | b1747 | 0.31 | +0.4 |
1,828,129 | - | astA | b1747 | 0.36 | +0.8 |
1,828,236 | + | astA | b1747 | 0.46 | +0.5 |
1,828,424 | - | astA | b1747 | 0.65 | +0.1 |
1,828,629 | + | astA | b1747 | 0.84 | -0.4 |
1,828,765 | + | +0.4 | |||
1,829,079 | + | astC | b1748 | 0.24 | +0.4 |
1,829,172 | + | astC | b1748 | 0.32 | -0.2 |
1,829,172 | + | astC | b1748 | 0.32 | +0.6 |
1,829,304 | - | astC | b1748 | 0.42 | +0.6 |
1,829,304 | - | astC | b1748 | 0.42 | -0.4 |
1,829,492 | - | astC | b1748 | 0.58 | +0.3 |
1,829,492 | - | astC | b1748 | 0.58 | +0.8 |
Or see this region's nucleotide sequence