Experiment: R2A with m-arsenite 0.8 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu3737 and Atu3738 are separated by 316 nucleotides Atu3738 and Atu3739 are separated by 67 nucleotides
Atu3737: Atu3737 - glyceraldehyde 3-phosphate dehydrogenase, at 817,118 to 818,128
Atu3737
Atu3738: Atu3738 - potassium/proton antiporter, at 818,445 to 820,310
Atu3738
Atu3739: Atu3739 - phosphoglycerate kinase, at 820,378 to 821,580
Atu3739
Position (kb) 818
819
820
821 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 817.572 kb on - strand, within Atu3737 at 817.927 kb on + strand, within Atu3737 at 818.141 kb on + strand at 818.149 kb on - strand at 818.253 kb on + strand at 818.261 kb on + strand at 818.288 kb on - strand at 818.297 kb on - strand at 818.425 kb on + strand at 818.425 kb on + strand at 818.425 kb on + strand at 818.479 kb on - strand at 818.499 kb on + strand at 818.507 kb on - strand at 818.517 kb on - strand at 818.582 kb on - strand at 818.652 kb on - strand, within Atu3738 at 818.753 kb on - strand, within Atu3738 at 818.785 kb on - strand, within Atu3738 at 818.891 kb on - strand, within Atu3738 at 818.947 kb on + strand, within Atu3738 at 818.955 kb on - strand, within Atu3738 at 818.981 kb on + strand, within Atu3738 at 818.983 kb on - strand, within Atu3738 at 818.984 kb on - strand, within Atu3738 at 819.081 kb on + strand, within Atu3738 at 819.089 kb on - strand, within Atu3738 at 819.181 kb on + strand, within Atu3738 at 819.309 kb on - strand, within Atu3738 at 819.407 kb on - strand, within Atu3738 at 819.409 kb on + strand, within Atu3738 at 819.417 kb on + strand, within Atu3738 at 819.442 kb on - strand, within Atu3738 at 819.507 kb on - strand, within Atu3738 at 819.581 kb on + strand, within Atu3738 at 819.581 kb on + strand, within Atu3738 at 819.708 kb on + strand, within Atu3738 at 819.729 kb on - strand, within Atu3738 at 819.733 kb on - strand, within Atu3738 at 819.746 kb on + strand, within Atu3738 at 819.851 kb on + strand, within Atu3738 at 819.859 kb on - strand, within Atu3738 at 819.972 kb on + strand, within Atu3738 at 819.979 kb on + strand, within Atu3738 at 819.980 kb on - strand, within Atu3738 at 819.989 kb on + strand, within Atu3738 at 820.016 kb on - strand, within Atu3738 at 820.018 kb on + strand, within Atu3738 at 820.063 kb on - strand, within Atu3738 at 820.084 kb on - strand, within Atu3738 at 820.144 kb on + strand at 820.202 kb on + strand at 820.225 kb on - strand at 820.242 kb on - strand at 820.278 kb on + strand at 820.278 kb on + strand at 820.345 kb on - strand at 820.345 kb on - strand at 820.368 kb on + strand at 821.072 kb on + strand, within Atu3739
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with m-arsenite 0.8 mM remove 817,572 - Atu3737 0.45 +1.1 817,927 + Atu3737 0.80 +0.9 818,141 + +0.0 818,149 - +0.1 818,253 + -1.1 818,261 + -0.9 818,288 - -0.0 818,297 - -0.0 818,425 + -0.6 818,425 + -3.1 818,425 + -1.5 818,479 - -0.7 818,499 + -1.5 818,507 - -2.2 818,517 - -0.3 818,582 - +1.9 818,652 - Atu3738 0.11 -2.1 818,753 - Atu3738 0.17 -2.7 818,785 - Atu3738 0.18 -1.2 818,891 - Atu3738 0.24 -0.9 818,947 + Atu3738 0.27 -1.2 818,955 - Atu3738 0.27 -1.0 818,981 + Atu3738 0.29 -1.1 818,983 - Atu3738 0.29 -1.7 818,984 - Atu3738 0.29 +0.4 819,081 + Atu3738 0.34 -0.6 819,089 - Atu3738 0.35 -0.1 819,181 + Atu3738 0.39 +0.3 819,309 - Atu3738 0.46 -2.0 819,407 - Atu3738 0.52 -1.3 819,409 + Atu3738 0.52 -1.7 819,417 + Atu3738 0.52 -0.8 819,442 - Atu3738 0.53 -0.7 819,507 - Atu3738 0.57 -1.9 819,581 + Atu3738 0.61 -2.7 819,581 + Atu3738 0.61 -1.3 819,708 + Atu3738 0.68 -2.8 819,729 - Atu3738 0.69 +0.2 819,733 - Atu3738 0.69 +1.5 819,746 + Atu3738 0.70 -1.6 819,851 + Atu3738 0.75 -1.3 819,859 - Atu3738 0.76 -0.3 819,972 + Atu3738 0.82 -2.4 819,979 + Atu3738 0.82 -0.5 819,980 - Atu3738 0.82 -0.5 819,989 + Atu3738 0.83 -1.6 820,016 - Atu3738 0.84 -0.8 820,018 + Atu3738 0.84 -2.8 820,063 - Atu3738 0.87 -0.1 820,084 - Atu3738 0.88 -1.3 820,144 + -0.9 820,202 + -0.5 820,225 - -0.2 820,242 - -1.9 820,278 + +0.2 820,278 + -3.3 820,345 - +0.6 820,345 - +0.0 820,368 + +0.6 821,072 + Atu3739 0.58 -0.4
Or see this region's nucleotide sequence