Experiment: R2A with m-arsenite 0.8 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu0947 and Atu0948 are separated by 31 nucleotides Atu0948 and Atu0949 are separated by 155 nucleotides Atu0949 and Atu0950 are separated by 23 nucleotides
Atu0947: Atu0947 - transcriptional regulator, AsnC family, at 936,462 to 936,893
Atu0947
Atu0948: Atu0948 - hypothetical protein, at 936,925 to 937,293
Atu0948
Atu0949: Atu0949 - hypothetical protein, at 937,449 to 938,288
Atu0949
Atu0950: Atu0950 - hypothetical protein, at 938,312 to 939,976
Atu0950
Position (kb) 937
938
939 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 936.535 kb on - strand, within Atu0947 at 936.661 kb on + strand, within Atu0947 at 936.661 kb on + strand, within Atu0947 at 936.676 kb on + strand, within Atu0947 at 936.857 kb on + strand at 936.906 kb on + strand at 936.906 kb on + strand at 936.906 kb on + strand at 936.906 kb on + strand at 936.906 kb on + strand at 936.906 kb on + strand at 936.923 kb on + strand at 937.121 kb on - strand, within Atu0948 at 937.148 kb on + strand, within Atu0948 at 937.213 kb on - strand, within Atu0948 at 937.237 kb on + strand, within Atu0948 at 937.237 kb on + strand, within Atu0948 at 937.237 kb on + strand, within Atu0948 at 937.240 kb on - strand, within Atu0948 at 937.245 kb on - strand, within Atu0948 at 937.245 kb on - strand, within Atu0948 at 937.245 kb on - strand, within Atu0948 at 937.532 kb on + strand at 937.552 kb on + strand, within Atu0949 at 937.628 kb on - strand, within Atu0949 at 937.645 kb on + strand, within Atu0949 at 937.653 kb on - strand, within Atu0949 at 937.729 kb on - strand, within Atu0949 at 937.973 kb on - strand, within Atu0949 at 937.975 kb on - strand, within Atu0949 at 937.995 kb on + strand, within Atu0949 at 938.003 kb on - strand, within Atu0949 at 938.003 kb on - strand, within Atu0949 at 938.020 kb on + strand, within Atu0949 at 938.075 kb on + strand, within Atu0949 at 938.146 kb on - strand, within Atu0949 at 938.165 kb on + strand, within Atu0949 at 938.165 kb on + strand, within Atu0949 at 938.165 kb on + strand, within Atu0949 at 938.173 kb on - strand, within Atu0949 at 938.173 kb on - strand, within Atu0949 at 938.173 kb on - strand, within Atu0949 at 938.184 kb on + strand, within Atu0949 at 938.193 kb on + strand, within Atu0949 at 938.227 kb on + strand at 938.273 kb on - strand at 938.283 kb on - strand at 938.401 kb on + strand at 938.426 kb on - strand at 938.453 kb on - strand at 938.527 kb on - strand, within Atu0950 at 938.546 kb on + strand, within Atu0950 at 938.594 kb on - strand, within Atu0950 at 938.678 kb on - strand, within Atu0950 at 938.863 kb on + strand, within Atu0950 at 938.937 kb on + strand, within Atu0950 at 938.945 kb on - strand, within Atu0950 at 938.945 kb on - strand, within Atu0950 at 939.061 kb on - strand, within Atu0950 at 939.068 kb on - strand, within Atu0950 at 939.107 kb on - strand, within Atu0950 at 939.113 kb on + strand, within Atu0950 at 939.121 kb on - strand, within Atu0950 at 939.143 kb on - strand, within Atu0950 at 939.169 kb on - strand, within Atu0950 at 939.215 kb on - strand, within Atu0950
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with m-arsenite 0.8 mM remove 936,535 - Atu0947 0.17 -0.4 936,661 + Atu0947 0.46 -0.5 936,661 + Atu0947 0.46 -1.6 936,676 + Atu0947 0.50 -1.3 936,857 + -1.8 936,906 + +0.1 936,906 + -1.2 936,906 + -1.3 936,906 + +1.2 936,906 + +0.5 936,906 + +0.4 936,923 + -0.6 937,121 - Atu0948 0.53 +0.6 937,148 + Atu0948 0.60 -2.9 937,213 - Atu0948 0.78 -0.3 937,237 + Atu0948 0.85 -1.4 937,237 + Atu0948 0.85 +1.2 937,237 + Atu0948 0.85 +0.4 937,240 - Atu0948 0.85 +0.0 937,245 - Atu0948 0.87 +0.7 937,245 - Atu0948 0.87 -1.3 937,245 - Atu0948 0.87 -1.5 937,532 + +0.2 937,552 + Atu0949 0.12 +1.3 937,628 - Atu0949 0.21 +0.4 937,645 + Atu0949 0.23 +0.7 937,653 - Atu0949 0.24 -0.1 937,729 - Atu0949 0.33 -0.6 937,973 - Atu0949 0.62 -0.5 937,975 - Atu0949 0.63 -0.9 937,995 + Atu0949 0.65 +0.3 938,003 - Atu0949 0.66 -1.6 938,003 - Atu0949 0.66 +0.3 938,020 + Atu0949 0.68 -0.3 938,075 + Atu0949 0.75 +0.1 938,146 - Atu0949 0.83 -0.5 938,165 + Atu0949 0.85 +2.1 938,165 + Atu0949 0.85 -0.2 938,165 + Atu0949 0.85 +0.1 938,173 - Atu0949 0.86 +0.1 938,173 - Atu0949 0.86 +0.9 938,173 - Atu0949 0.86 +0.1 938,184 + Atu0949 0.88 +0.5 938,193 + Atu0949 0.89 +1.2 938,227 + +0.2 938,273 - +0.4 938,283 - -0.2 938,401 + +0.4 938,426 - -2.1 938,453 - -0.6 938,527 - Atu0950 0.13 -0.4 938,546 + Atu0950 0.14 +0.5 938,594 - Atu0950 0.17 +1.6 938,678 - Atu0950 0.22 +0.5 938,863 + Atu0950 0.33 +0.0 938,937 + Atu0950 0.38 -0.1 938,945 - Atu0950 0.38 -0.0 938,945 - Atu0950 0.38 -0.4 939,061 - Atu0950 0.45 -0.1 939,068 - Atu0950 0.45 -0.1 939,107 - Atu0950 0.48 -1.3 939,113 + Atu0950 0.48 -1.7 939,121 - Atu0950 0.49 +0.4 939,143 - Atu0950 0.50 +0.1 939,169 - Atu0950 0.51 +0.6 939,215 - Atu0950 0.54 -1.5
Or see this region's nucleotide sequence