Experiment: R2A with m-arsenite 0.8 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu0650 and Atu0651 are separated by 119 nucleotides Atu0651 and Atu0652 are separated by 76 nucleotides
Atu0650: Atu0650 - hypothetical protein, at 642,860 to 643,660
Atu0650
Atu0651: Atu0651 - 4-hydroxybenzoate octaprenyltransferase, at 643,780 to 644,733
Atu0651
Atu0652: Atu0652 - hypothetical protein, at 644,810 to 645,376
Atu0652
Position (kb) 643
644
645 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 642.787 kb on + strand at 642.862 kb on + strand at 642.921 kb on - strand at 642.921 kb on - strand at 642.974 kb on + strand, within Atu0650 at 643.072 kb on - strand, within Atu0650 at 643.120 kb on - strand, within Atu0650 at 643.130 kb on - strand, within Atu0650 at 643.183 kb on - strand, within Atu0650 at 643.206 kb on + strand, within Atu0650 at 643.211 kb on + strand, within Atu0650 at 643.211 kb on + strand, within Atu0650 at 643.214 kb on - strand, within Atu0650 at 643.352 kb on - strand, within Atu0650 at 643.352 kb on - strand, within Atu0650 at 643.381 kb on - strand, within Atu0650 at 643.402 kb on + strand, within Atu0650 at 643.410 kb on - strand, within Atu0650 at 643.541 kb on + strand, within Atu0650 at 643.652 kb on - strand at 643.654 kb on + strand at 643.654 kb on + strand at 643.654 kb on + strand at 643.662 kb on - strand at 643.662 kb on - strand at 643.662 kb on - strand at 643.662 kb on - strand at 643.662 kb on - strand at 643.668 kb on + strand at 643.668 kb on + strand at 643.734 kb on + strand at 645.529 kb on + strand at 645.553 kb on + strand at 645.563 kb on + strand at 645.667 kb on - strand at 645.708 kb on + strand at 645.722 kb on - strand at 645.729 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with m-arsenite 0.8 mM remove 642,787 + +0.4 642,862 + +0.4 642,921 - +0.2 642,921 - -0.8 642,974 + Atu0650 0.14 +0.1 643,072 - Atu0650 0.26 +0.2 643,120 - Atu0650 0.32 +0.4 643,130 - Atu0650 0.34 +0.4 643,183 - Atu0650 0.40 +0.9 643,206 + Atu0650 0.43 -0.2 643,211 + Atu0650 0.44 -0.2 643,211 + Atu0650 0.44 +0.3 643,214 - Atu0650 0.44 +0.4 643,352 - Atu0650 0.61 +0.2 643,352 - Atu0650 0.61 +0.8 643,381 - Atu0650 0.65 -1.0 643,402 + Atu0650 0.68 +1.0 643,410 - Atu0650 0.69 -1.8 643,541 + Atu0650 0.85 +0.0 643,652 - +0.3 643,654 + -0.6 643,654 + -0.1 643,654 + +0.6 643,662 - +1.6 643,662 - -0.1 643,662 - -0.9 643,662 - -0.0 643,662 - +0.1 643,668 + +4.0 643,668 + +0.4 643,734 + -1.6 645,529 + -0.3 645,553 + +0.4 645,563 + -0.4 645,667 - +0.7 645,708 + +0.7 645,722 - -0.2 645,729 + -0.1
Or see this region's nucleotide sequence