Strain Fitness in Escherichia coli BW25113 around b1732
Experiment: undecene 2.5 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | undecene 2.5 vol% |
---|---|---|---|---|---|
remove | |||||
1,811,304 | - | -0.4 | |||
1,811,393 | - | -0.5 | |||
1,811,444 | - | +0.4 | |||
1,811,505 | - | cedA | b1731 | 0.25 | +0.4 |
1,811,536 | - | cedA | b1731 | 0.37 | +0.8 |
1,811,536 | - | cedA | b1731 | 0.37 | +0.6 |
1,811,541 | + | cedA | b1731 | 0.40 | +0.8 |
1,811,814 | + | -0.6 | |||
1,811,821 | + | +0.2 | |||
1,812,027 | + | +1.1 | |||
1,812,052 | + | -0.3 | |||
1,812,060 | - | +0.6 | |||
1,812,106 | - | -0.0 | |||
1,812,243 | + | katE | b1732 | 0.16 | +0.2 |
1,812,269 | + | katE | b1732 | 0.17 | -0.6 |
1,812,423 | - | katE | b1732 | 0.24 | +0.2 |
1,812,649 | + | katE | b1732 | 0.34 | -1.0 |
1,812,649 | + | katE | b1732 | 0.34 | -0.8 |
1,812,667 | + | katE | b1732 | 0.34 | +1.6 |
1,812,700 | - | katE | b1732 | 0.36 | -0.1 |
1,813,059 | + | katE | b1732 | 0.52 | -1.3 |
1,813,059 | + | katE | b1732 | 0.52 | -0.9 |
1,813,137 | - | katE | b1732 | 0.55 | +1.2 |
1,813,139 | - | katE | b1732 | 0.55 | -2.0 |
1,813,139 | - | katE | b1732 | 0.55 | +1.7 |
1,813,423 | - | katE | b1732 | 0.68 | +0.1 |
1,813,423 | - | katE | b1732 | 0.68 | -0.3 |
1,813,608 | - | katE | b1732 | 0.76 | +0.5 |
1,813,685 | - | katE | b1732 | 0.79 | -0.0 |
1,813,690 | - | katE | b1732 | 0.80 | -2.0 |
1,813,735 | + | katE | b1732 | 0.82 | -0.0 |
1,813,963 | + | -0.5 | |||
1,813,963 | + | +0.0 | |||
1,813,971 | - | -0.5 | |||
1,814,415 | - | +0.8 | |||
1,814,415 | - | -0.4 | |||
1,814,484 | + | +0.5 | |||
1,814,510 | - | chbG | b1733 | 0.13 | +0.3 |
1,814,658 | + | chbG | b1733 | 0.33 | +1.6 |
1,814,658 | + | chbG | b1733 | 0.33 | -0.2 |
1,814,702 | - | chbG | b1733 | 0.39 | +0.4 |
1,814,945 | + | chbG | b1733 | 0.71 | -0.5 |
1,814,945 | + | chbG | b1733 | 0.71 | -0.7 |
1,815,106 | - | +0.5 | |||
1,815,143 | + | +0.6 |
Or see this region's nucleotide sequence