Strain Fitness in Escherichia coli BW25113 around b3942

Experiment: undecene 2.5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	undecene 2.5 vol%
4,130,861	-	metF	b3941	0.25	-0.1
4,130,882	+	metF	b3941	0.27	+0.0
4,130,883	+	metF	b3941	0.27	+0.3
4,130,885	-	metF	b3941	0.28	+0.8
4,130,885	-	metF	b3941	0.28	+0.7
4,130,940	+	metF	b3941	0.34	+0.6
4,131,034	-	metF	b3941	0.44	-0.1
4,131,079	+	metF	b3941	0.49	+0.1
4,131,236	-	metF	b3941	0.67	-0.4
4,131,286	-	metF	b3941	0.73	+0.4
4,131,368	-	metF	b3941	0.82	+0.3
4,131,372	-	metF	b3941	0.82	+0.0
4,131,372	-	metF	b3941	0.82	+1.7
4,131,372	-	metF	b3941	0.82	+0.6
4,131,372	-	metF	b3941	0.82	+0.2
4,131,420	-	metF	b3941	0.88	+0.3
4,131,435	+	metF	b3941	0.89	-0.0
4,131,465	+				+2.8
4,131,466	+				+0.5
4,131,468	-				+0.2
4,131,468	-				+0.1
4,131,472	-				+0.5
4,131,474	+				-0.3
4,131,474	+				+0.3
4,131,474	-				-0.4
4,131,474	-				+0.1
4,131,529	-				-0.1
4,131,548	+				-0.1
4,131,548	+				+0.0
4,131,586	-				+0.1
4,131,593	-				+0.1
4,131,626	+				+0.1
4,131,737	+				+0.1
4,131,737	+				+1.0
4,131,809	+				+0.0
4,131,819	+				+1.2
4,131,830	+				+0.4
4,131,835	+				+1.2
4,131,838	+				+1.3
4,131,838	+				+1.0
4,131,838	+				-1.9
4,131,838	+				+1.2
4,131,838	-				+1.5
4,131,838	-				+2.2
4,131,838	-				+2.2
4,131,840	+				+0.8
4,131,846	-				-0.5
4,131,846	-				+1.1
4,131,848	-				+0.6
4,131,855	-				+0.7
4,131,855	-				+1.5
4,131,873	+				+0.9
4,131,884	-				+1.5
4,131,934	+				+0.3
4,131,934	-				+2.9
4,131,957	+				+1.0
4,131,991	+				+0.7
4,132,015	+				+0.5
4,132,025	+				+1.6
4,132,027	-				+1.4
4,132,065	+				+1.2
4,132,065	+				+0.7
4,132,072	-				+0.9
4,132,126	+	katG	b3942	0.12	+0.3
4,132,140	+	katG	b3942	0.13	+1.8
4,132,167	+	katG	b3942	0.14	+1.8
4,132,167	+	katG	b3942	0.14	+1.0
4,132,244	+	katG	b3942	0.18	+1.6
4,132,244	+	katG	b3942	0.18	+0.9
4,132,254	+	katG	b3942	0.18	+1.0
4,132,300	-	katG	b3942	0.20	+1.0
4,132,300	-	katG	b3942	0.20	+1.5
4,132,409	-	katG	b3942	0.25	+0.8
4,132,463	-	katG	b3942	0.28	+1.1
4,132,465	+	katG	b3942	0.28	+1.7
4,132,569	-	katG	b3942	0.33	+2.0
4,132,569	-	katG	b3942	0.33	+1.5
4,132,584	+	katG	b3942	0.33	+1.5
4,132,608	-	katG	b3942	0.34	+1.5
4,132,643	+	katG	b3942	0.36	+1.0
4,132,651	-	katG	b3942	0.36	+1.2
4,132,654	+	katG	b3942	0.36	+1.6
4,132,654	+	katG	b3942	0.36	+1.3
4,132,672	-	katG	b3942	0.37	+2.2
4,132,678	+	katG	b3942	0.38	+1.1
4,132,686	-	katG	b3942	0.38	+1.3
4,132,686	-	katG	b3942	0.38	+0.9
4,132,686	-	katG	b3942	0.38	+1.1
4,132,722	-	katG	b3942	0.40	+1.1
4,132,755	+	katG	b3942	0.41	+1.0
4,132,763	-	katG	b3942	0.41	+1.2
4,132,803	-	katG	b3942	0.43	+1.4
4,132,829	+	katG	b3942	0.45	+1.2
4,132,860	+	katG	b3942	0.46	+1.5
4,132,860	+	katG	b3942	0.46	+1.8
4,132,864	-	katG	b3942	0.46	+2.0
4,132,864	-	katG	b3942	0.46	+1.0
4,132,867	+	katG	b3942	0.46	+0.8
4,132,872	+	katG	b3942	0.46	+0.7
4,132,875	-	katG	b3942	0.47	+0.3
4,132,877	+	katG	b3942	0.47	+0.7
4,133,064	+	katG	b3942	0.55	+0.3
4,133,064	+	katG	b3942	0.55	-0.5
4,133,071	+	katG	b3942	0.56	+1.6
4,133,076	+	katG	b3942	0.56	+0.5
4,133,117	+	katG	b3942	0.58	+0.9
4,133,182	+	katG	b3942	0.61	+1.6
4,133,182	+	katG	b3942	0.61	+0.5
4,133,196	+	katG	b3942	0.61	+3.4
4,133,201	+	katG	b3942	0.62	-0.5
4,133,201	+	katG	b3942	0.62	+0.5
4,133,228	+	katG	b3942	0.63	+1.2
4,133,314	-	katG	b3942	0.67	+1.3
4,133,358	+	katG	b3942	0.69	+1.6
4,133,435	+	katG	b3942	0.72	+1.4
4,133,435	+	katG	b3942	0.72	+0.2
4,133,445	-	katG	b3942	0.73	+1.8
4,133,464	+	katG	b3942	0.74	+1.1
4,133,500	+	katG	b3942	0.75	+1.5
4,133,500	+	katG	b3942	0.75	+1.0
4,133,551	+	katG	b3942	0.78	+1.4
4,133,618	-	katG	b3942	0.81	+1.3
4,133,650	+	katG	b3942	0.82	+1.8
4,133,704	+	katG	b3942	0.85	+1.5
4,133,709	+	katG	b3942	0.85	+1.1
4,133,709	+	katG	b3942	0.85	+1.5
4,133,866	-				+0.7
4,133,951	+				+0.2
4,133,994	+				+0.7
4,134,022	+				+0.2
4,134,030	-				+1.3
4,134,032	+				+0.2
4,134,032	+				+0.4
4,134,089	-				+1.1
4,134,090	+				+0.5
4,134,091	+				+0.3
4,134,091	+				+1.5
4,134,098	-				+0.9
4,134,098	-				+0.1
4,134,153	+				+0.8
4,134,168	-				+2.1
4,134,168	-				-0.3
4,134,175	+				+1.2
4,134,238	-	yijE	b3943	0.12	-0.2
4,134,242	-	yijE	b3943	0.12	+0.6
4,134,259	-	yijE	b3943	0.14	+0.7
4,134,259	-	yijE	b3943	0.14	+0.2
4,134,283	+	yijE	b3943	0.17	-1.5
4,134,283	+	yijE	b3943	0.17	-0.6
4,134,301	+	yijE	b3943	0.19	-0.3
4,134,361	+	yijE	b3943	0.25	+0.5
4,134,422	-	yijE	b3943	0.32	-0.1
4,134,422	-	yijE	b3943	0.32	-0.1
4,134,424	-	yijE	b3943	0.32	-0.1
4,134,431	+	yijE	b3943	0.33	-0.4
4,134,438	+	yijE	b3943	0.34	+0.3
4,134,444	-	yijE	b3943	0.35	+0.2
4,134,451	+	yijE	b3943	0.35	-0.1
4,134,486	+	yijE	b3943	0.39	+0.4
4,134,655	-	yijE	b3943	0.58	-0.6
4,134,655	-	yijE	b3943	0.58	-0.4
4,134,674	+	yijE	b3943	0.60	-0.2
4,134,674	+	yijE	b3943	0.60	+0.8
4,134,693	-	yijE	b3943	0.62	+0.6
4,134,726	+	yijE	b3943	0.66	-0.2
4,134,734	-	yijE	b3943	0.67	+0.5
4,134,811	-	yijE	b3943	0.75	-0.2
4,134,811	-	yijE	b3943	0.75	-0.5
4,134,821	+	yijE	b3943	0.76	-0.0
4,134,828	+	yijE	b3943	0.77	+0.3
4,134,828	+	yijE	b3943	0.77	-1.7
4,134,828	+	yijE	b3943	0.77	+0.1
4,134,845	-	yijE	b3943	0.79	+1.2
4,134,845	-	yijE	b3943	0.79	-0.0
4,134,884	-	yijE	b3943	0.83	-0.1
4,134,905	+	yijE	b3943	0.85	+0.9
4,134,960	+				+0.6
4,134,960	+				+1.0
4,134,960	+				+0.2
4,134,989	+				+0.1