Strain Fitness in Escherichia coli BW25113 around b2436
Experiment: undecene 2.5 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | undecene 2.5 vol% |
---|---|---|---|---|---|
remove | |||||
2,550,357 | + | +0.5 | |||
2,550,357 | + | +0.3 | |||
2,550,381 | + | -0.0 | |||
2,550,597 | - | amiA | b2435 | 0.26 | -0.0 |
2,550,631 | - | amiA | b2435 | 0.30 | -0.1 |
2,550,747 | + | amiA | b2435 | 0.43 | -0.0 |
2,550,779 | + | amiA | b2435 | 0.47 | -0.7 |
2,550,779 | + | amiA | b2435 | 0.47 | +1.2 |
2,551,032 | + | amiA | b2435 | 0.76 | +0.5 |
2,551,066 | - | amiA | b2435 | 0.80 | +0.8 |
2,551,197 | + | +0.6 | |||
2,551,266 | + | -2.0 | |||
2,551,295 | - | -0.8 | |||
2,551,295 | - | -1.2 | |||
2,551,355 | - | hemF | b2436 | 0.12 | -0.7 |
2,551,444 | + | hemF | b2436 | 0.22 | -1.0 |
2,551,444 | + | hemF | b2436 | 0.22 | -0.6 |
2,551,531 | - | hemF | b2436 | 0.32 | -1.7 |
2,551,643 | - | hemF | b2436 | 0.44 | -0.2 |
2,551,645 | + | hemF | b2436 | 0.44 | -2.5 |
2,551,678 | + | hemF | b2436 | 0.48 | -3.0 |
2,551,678 | + | hemF | b2436 | 0.48 | -2.3 |
2,551,837 | + | hemF | b2436 | 0.66 | -1.2 |
2,551,837 | + | hemF | b2436 | 0.66 | -2.6 |
2,552,065 | - | -2.5 | |||
2,552,065 | - | -0.6 | |||
2,552,087 | + | -2.9 | |||
2,552,087 | + | -2.3 | |||
2,552,141 | + | -0.1 | |||
2,552,262 | - | yfeG | b2437 | 0.10 | +0.3 |
2,552,262 | - | yfeG | b2437 | 0.10 | +0.6 |
2,552,460 | + | yfeG | b2437 | 0.29 | +0.4 |
2,552,460 | + | yfeG | b2437 | 0.29 | -0.5 |
2,552,659 | - | yfeG | b2437 | 0.48 | -0.4 |
2,552,659 | - | yfeG | b2437 | 0.48 | +0.8 |
2,552,719 | - | yfeG | b2437 | 0.54 | -0.1 |
2,552,790 | - | yfeG | b2437 | 0.61 | +0.3 |
2,552,790 | - | yfeG | b2437 | 0.61 | -0.0 |
2,552,812 | - | yfeG | b2437 | 0.63 | -0.5 |
2,552,812 | - | yfeG | b2437 | 0.63 | -0.8 |
2,552,881 | + | yfeG | b2437 | 0.69 | -2.3 |
2,552,881 | + | yfeG | b2437 | 0.69 | +1.6 |
2,552,917 | + | yfeG | b2437 | 0.73 | -0.0 |
2,552,917 | + | yfeG | b2437 | 0.73 | -0.1 |
2,552,932 | + | yfeG | b2437 | 0.74 | +0.7 |
2,552,992 | - | yfeG | b2437 | 0.80 | -0.2 |
Or see this region's nucleotide sequence