Strain Fitness in Escherichia coli BW25113 around b3789

Experiment: undecene 5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	undecene 5 vol%
3,970,637	-				+2.2
3,970,663	+	rffG	b3788	0.11	-1.1
3,970,665	-	rffG	b3788	0.11	+3.3
3,970,676	+	rffG	b3788	0.12	-0.5
3,970,693	-	rffG	b3788	0.14	+2.4
3,970,693	-	rffG	b3788	0.14	+2.4
3,970,732	+	rffG	b3788	0.18	-0.1
3,970,737	+	rffG	b3788	0.18	-1.1
3,970,772	-	rffG	b3788	0.21	+1.7
3,970,784	+	rffG	b3788	0.22	+0.2
3,970,784	+	rffG	b3788	0.22	-2.5
3,970,784	-	rffG	b3788	0.22	+4.3
3,970,811	+	rffG	b3788	0.25	-0.8
3,970,820	-	rffG	b3788	0.26	+3.7
3,970,820	-	rffG	b3788	0.26	+4.5
3,970,823	-	rffG	b3788	0.26	+4.4
3,970,830	-	rffG	b3788	0.27	+3.0
3,970,856	+	rffG	b3788	0.29	+0.5
3,970,866	-	rffG	b3788	0.30	+3.3
3,970,875	-	rffG	b3788	0.31	+3.4
3,970,875	-	rffG	b3788	0.31	+2.8
3,970,876	-	rffG	b3788	0.31	+2.5
3,970,953	+	rffG	b3788	0.38	-2.1
3,970,953	+	rffG	b3788	0.38	-1.2
3,970,960	-	rffG	b3788	0.39	+2.3
3,970,960	-	rffG	b3788	0.39	+3.1
3,970,963	+	rffG	b3788	0.39	+0.8
3,971,010	-	rffG	b3788	0.44	+3.0
3,971,010	-	rffG	b3788	0.44	+3.7
3,971,012	+	rffG	b3788	0.44	-0.0
3,971,044	-	rffG	b3788	0.47	+1.8
3,971,049	+	rffG	b3788	0.47	+0.3
3,971,066	+	rffG	b3788	0.49	+2.1
3,971,066	+	rffG	b3788	0.49	+0.1
3,971,074	-	rffG	b3788	0.50	+2.8
3,971,080	-	rffG	b3788	0.50	+1.7
3,971,110	-	rffG	b3788	0.53	+1.8
3,971,114	+	rffG	b3788	0.53	-1.2
3,971,174	+	rffG	b3788	0.59	-0.2
3,971,190	+	rffG	b3788	0.60	-0.5
3,971,255	-	rffG	b3788	0.66	+2.0
3,971,260	-	rffG	b3788	0.67	+1.3
3,971,260	-	rffG	b3788	0.67	+1.9
3,971,260	-	rffG	b3788	0.67	+1.1
3,971,260	-	rffG	b3788	0.67	+2.5
3,971,260	-	rffG	b3788	0.67	+1.8
3,971,260	-	rffG	b3788	0.67	+1.6
3,971,338	+	rffG	b3788	0.74	+0.1
3,971,359	+	rffG	b3788	0.76	-2.5
3,971,383	+	rffG	b3788	0.78	-0.9
3,971,395	+	rffG	b3788	0.80	-0.4
3,971,395	+	rffG	b3788	0.80	-2.0
3,971,403	-				+1.5
3,971,403	-	rffG	b3788	0.80	+2.3
3,971,421	+	rffG	b3788	0.82	-0.9
3,971,436	+	rffG	b3788	0.83	-0.3
3,971,436	+	rffG	b3788	0.83	-0.5
3,971,446	+	rffG	b3788	0.84	-0.5
3,971,449	-	rffG	b3788	0.85	+2.6
3,971,534	+				+0.5
3,971,540	+				-1.1
3,971,573	-				+2.4
3,971,573	-				+1.6
3,971,581	-				+2.3
3,971,587	-				+1.5
3,971,587	-				+2.4
3,971,593	+				-0.7
3,971,598	+				-0.9
3,971,598	+				-1.6
3,971,601	-				+1.6
3,971,656	+				+0.0
3,971,705	-				+3.1
3,971,729	+	rffH	b3789	0.11	+0.1
3,971,768	-	rffH	b3789	0.16	+2.8
3,971,775	+	rffH	b3789	0.16	-0.5
3,971,775	+	rffH	b3789	0.16	+0.2
3,971,820	+	rffH	b3789	0.21	-1.0
3,971,825	+	rffH	b3789	0.22	-0.6
3,971,838	-	rffH	b3789	0.23	+3.3
3,971,878	-	rffH	b3789	0.28	+3.0
3,971,878	-	rffH	b3789	0.28	+3.1
3,971,883	+	rffH	b3789	0.29	-1.1
3,971,951	-	rffH	b3789	0.36	+3.7
3,971,951	-	rffH	b3789	0.36	+3.4
3,971,967	+	rffH	b3789	0.38	-0.4
3,971,980	+	rffH	b3789	0.40	-0.3
3,971,980	+	rffH	b3789	0.40	-0.7
3,972,063	-	rffH	b3789	0.49	+2.7
3,972,161	+	rffH	b3789	0.60	-2.3
3,972,168	+	rffH	b3789	0.61	+1.0
3,972,168	+	rffH	b3789	0.61	-0.1
3,972,178	+	rffH	b3789	0.62	-0.5
3,972,210	+	rffH	b3789	0.66	-0.2
3,972,244	-	rffH	b3789	0.70	+2.4
3,972,256	+	rffH	b3789	0.71	-0.9
3,972,315	+	rffH	b3789	0.78	-1.0
3,972,315	+	rffH	b3789	0.78	-0.5
3,972,334	+	rffH	b3789	0.80	-2.1
3,972,344	-	rffH	b3789	0.81	+2.8
3,972,344	-	rffH	b3789	0.81	+3.0
3,972,357	+	rffH	b3789	0.82	-0.8
3,972,372	-	rffH	b3789	0.84	+2.9
3,972,387	-	rffH	b3789	0.86	+2.6
3,972,387	-	rffH	b3789	0.86	+3.9
3,972,423	+	rffH	b3789	0.90	-1.2
3,972,423	+	rffH	b3789	0.90	-0.5
3,972,423	+	rffH	b3789	0.90	-0.9
3,972,423	+	rffH	b3789	0.90	-0.0
3,972,423	+	rffH	b3789	0.90	-0.6
3,972,431	-				+2.9
3,972,431	-				+2.7
3,972,431	-				+3.2
3,972,448	-				+1.5
3,972,448	-				+2.5
3,972,449	+				-2.0
3,972,449	+				-1.1
3,972,466	+				-1.4
3,972,470	+				-0.9
3,972,488	-				+2.3
3,972,504	-				+2.8
3,972,504	-				+3.0
3,972,509	-				+4.0
3,972,542	-				+3.8
3,972,593	-	rffC	b3790	0.15	+3.6
3,972,607	-	rffC	b3790	0.17	+4.0
3,972,657	-	rffC	b3790	0.25	+3.8
3,972,657	-	rffC	b3790	0.25	+4.2
3,972,669	-	rffC	b3790	0.27	+3.7
3,972,669	-	rffC	b3790	0.27	+3.2
3,972,670	-	rffC	b3790	0.27	+3.4
3,972,684	-	rffC	b3790	0.29	+3.4
3,972,694	-	rffC	b3790	0.30	+4.3
3,972,694	-	rffC	b3790	0.30	+3.8
3,972,748	-	rffC	b3790	0.38	+3.3
3,972,748	-	rffC	b3790	0.38	+3.4
3,972,862	-	rffC	b3790	0.55	+3.6
3,972,867	-	rffC	b3790	0.56	+4.4
3,972,880	-	rffC	b3790	0.58	+3.6
3,973,012	-	rffC	b3790	0.77	+4.4
3,973,018	-	rffC	b3790	0.78	+3.5
3,973,072	-	rffC	b3790	0.86	+3.7
3,973,140	-				+3.7
3,973,208	-				+3.5
3,973,210	+				+4.5
3,973,215	+				-0.9
3,973,222	-				+3.6
3,973,222	-				+3.3
3,973,240	-				+3.0
3,973,244	-				+2.6
3,973,254	-				+3.0
3,973,254	-				+4.4
3,973,260	+				+1.8
3,973,327	+	rffA	b3791	0.14	+4.2
3,973,327	+	rffA	b3791	0.14	+2.8
3,973,327	+	rffA	b3791	0.14	+3.3
3,973,327	+	rffA	b3791	0.14	+4.2
3,973,330	+	rffA	b3791	0.14	+5.2
3,973,337	+	rffA	b3791	0.15	+2.7
3,973,441	-	rffA	b3791	0.24	+2.3
3,973,504	-	rffA	b3791	0.30	+2.7