Experiment: undecene 5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt trkH and hemG are separated by 11 nucleotides hemG and rrsA are separated by 377 nucleotides
b3849: trkH - potassium transporter (NCBI), at 4,031,168 to 4,032,619
trkH
b3850: hemG - protoporphyrin oxidase, flavoprotein (NCBI), at 4,032,631 to 4,033,176
hemG
b3851: rrsA - 16S ribosomal RNA (NCBI), at 4,033,554 to 4,035,095
rrsA
Position (kb)
4032
4033
4034 Strain fitness (log2 ratio)
-1
0
1
2 at 4031.636 kb on - strand, within trkH at 4031.636 kb on - strand, within trkH at 4031.637 kb on + strand, within trkH at 4031.639 kb on + strand, within trkH at 4031.642 kb on + strand, within trkH at 4031.652 kb on - strand, within trkH at 4031.728 kb on + strand, within trkH at 4031.728 kb on + strand, within trkH at 4031.787 kb on + strand, within trkH at 4031.816 kb on - strand, within trkH at 4031.857 kb on - strand, within trkH at 4031.884 kb on - strand, within trkH at 4031.886 kb on - strand, within trkH at 4031.886 kb on - strand, within trkH at 4031.944 kb on + strand, within trkH at 4032.035 kb on + strand, within trkH at 4032.056 kb on + strand, within trkH at 4032.064 kb on - strand, within trkH at 4032.064 kb on - strand, within trkH at 4032.078 kb on + strand, within trkH at 4032.078 kb on + strand, within trkH at 4032.102 kb on - strand, within trkH at 4032.136 kb on + strand, within trkH at 4032.142 kb on - strand, within trkH at 4032.245 kb on - strand, within trkH at 4032.253 kb on + strand, within trkH at 4032.287 kb on + strand, within trkH at 4032.287 kb on + strand, within trkH at 4032.298 kb on - strand, within trkH at 4032.340 kb on - strand, within trkH at 4032.386 kb on - strand, within trkH at 4032.421 kb on + strand, within trkH at 4032.425 kb on - strand, within trkH at 4032.425 kb on - strand, within trkH at 4032.433 kb on + strand, within trkH at 4032.433 kb on + strand, within trkH at 4032.452 kb on + strand, within trkH at 4032.505 kb on - strand at 4032.505 kb on - strand at 4032.509 kb on + strand at 4032.521 kb on - strand at 4032.592 kb on - strand at 4032.604 kb on + strand at 4032.614 kb on + strand at 4032.622 kb on + strand at 4032.624 kb on - strand at 4032.960 kb on - strand, within hemG
Per-strain Table
Position Strand Gene LocusTag Fraction undecene 5 vol% remove 4,031,636 - trkH b3849 0.32 -0.5 4,031,636 - trkH b3849 0.32 +0.8 4,031,637 + trkH b3849 0.32 +0.5 4,031,639 + trkH b3849 0.32 +1.7 4,031,642 + trkH b3849 0.33 +1.2 4,031,652 - trkH b3849 0.33 -0.5 4,031,728 + trkH b3849 0.39 -0.1 4,031,728 + trkH b3849 0.39 +0.2 4,031,787 + trkH b3849 0.43 +0.1 4,031,816 - trkH b3849 0.45 +0.3 4,031,857 - trkH b3849 0.47 -0.1 4,031,884 - trkH b3849 0.49 +1.2 4,031,886 - trkH b3849 0.49 +0.6 4,031,886 - trkH b3849 0.49 +0.1 4,031,944 + trkH b3849 0.53 +1.2 4,032,035 + trkH b3849 0.60 +0.4 4,032,056 + trkH b3849 0.61 +0.5 4,032,064 - trkH b3849 0.62 +0.0 4,032,064 - trkH b3849 0.62 +1.3 4,032,078 + trkH b3849 0.63 +0.4 4,032,078 + trkH b3849 0.63 +1.2 4,032,102 - trkH b3849 0.64 -0.1 4,032,136 + trkH b3849 0.67 +0.5 4,032,142 - trkH b3849 0.67 +0.5 4,032,245 - trkH b3849 0.74 -0.7 4,032,253 + trkH b3849 0.75 +1.1 4,032,287 + trkH b3849 0.77 +0.3 4,032,287 + trkH b3849 0.77 +1.4 4,032,298 - trkH b3849 0.78 +0.7 4,032,340 - trkH b3849 0.81 +1.9 4,032,386 - trkH b3849 0.84 +0.6 4,032,421 + trkH b3849 0.86 +0.8 4,032,425 - trkH b3849 0.87 -0.7 4,032,425 - trkH b3849 0.87 +1.8 4,032,433 + trkH b3849 0.87 +0.9 4,032,433 + trkH b3849 0.87 -1.4 4,032,452 + trkH b3849 0.88 +0.7 4,032,505 - +0.3 4,032,505 - +0.1 4,032,509 + +0.7 4,032,521 - -0.9 4,032,592 - +1.4 4,032,604 + -0.6 4,032,614 + -0.5 4,032,622 + +0.4 4,032,624 - +0.5 4,032,960 - hemG b3850 0.60 +0.2
Or see this region's nucleotide sequence