Strain Fitness in Escherichia coli BW25113 around b2394
Experiment: undecene 5 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | undecene 5 vol% |
---|---|---|---|---|---|
remove | |||||
2,511,365 | + | nupC | b2393 | 0.25 | +1.2 |
2,511,504 | + | nupC | b2393 | 0.37 | +0.8 |
2,511,504 | + | nupC | b2393 | 0.37 | +0.4 |
2,511,564 | + | nupC | b2393 | 0.42 | +1.9 |
2,511,623 | - | nupC | b2393 | 0.46 | +0.9 |
2,511,623 | - | nupC | b2393 | 0.46 | +0.8 |
2,511,690 | + | nupC | b2393 | 0.52 | +0.8 |
2,511,730 | - | nupC | b2393 | 0.55 | +0.7 |
2,511,918 | + | nupC | b2393 | 0.71 | +0.4 |
2,511,930 | - | nupC | b2393 | 0.72 | +0.7 |
2,511,993 | - | nupC | b2393 | 0.77 | +0.0 |
2,511,995 | + | nupC | b2393 | 0.77 | +1.1 |
2,511,995 | + | nupC | b2393 | 0.77 | +0.3 |
2,512,099 | - | nupC | b2393 | 0.86 | +1.0 |
2,512,099 | - | nupC | b2393 | 0.86 | +1.5 |
2,512,222 | - | -0.1 | |||
2,512,222 | - | +0.9 | |||
2,512,227 | - | -0.9 | |||
2,512,228 | + | +0.9 | |||
2,512,331 | - | -0.5 | |||
2,512,331 | - | -0.2 | |||
2,513,680 | - | +0.0 | |||
2,513,680 | - | +0.3 | |||
2,513,751 | - | +0.2 | |||
2,513,769 | + | -0.1 | |||
2,513,775 | + | -0.0 | |||
2,514,032 | - | yfeA | b2395 | 0.17 | -0.7 |
2,514,112 | - | yfeA | b2395 | 0.20 | -0.0 |
2,514,161 | + | yfeA | b2395 | 0.23 | +0.4 |
2,514,223 | + | yfeA | b2395 | 0.25 | +0.6 |
2,514,223 | - | yfeA | b2395 | 0.25 | -0.1 |
2,514,235 | - | yfeA | b2395 | 0.26 | -0.3 |
2,514,345 | - | yfeA | b2395 | 0.31 | +1.2 |
2,514,345 | - | yfeA | b2395 | 0.31 | -0.8 |
2,514,354 | + | yfeA | b2395 | 0.31 | +0.6 |
2,514,355 | + | yfeA | b2395 | 0.32 | -0.3 |
2,514,369 | + | yfeA | b2395 | 0.32 | +0.8 |
2,514,396 | - | yfeA | b2395 | 0.33 | +0.7 |
2,514,413 | + | yfeA | b2395 | 0.34 | +0.0 |
2,514,413 | + | yfeA | b2395 | 0.34 | +0.5 |
2,514,425 | + | yfeA | b2395 | 0.35 | +0.1 |
2,514,428 | - | yfeA | b2395 | 0.35 | +0.2 |
2,514,436 | + | yfeA | b2395 | 0.35 | +0.1 |
2,514,458 | - | yfeA | b2395 | 0.36 | +0.2 |
2,514,458 | - | yfeA | b2395 | 0.36 | +0.4 |
Or see this region's nucleotide sequence