Experiment: marine_broth_2216 with Chloride 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_00415 and CA264_00420 are separated by 77 nucleotides CA264_00420 and CA264_00425 are separated by 254 nucleotides CA264_00425 and CA264_00430 are separated by 119 nucleotides
CA264_00415: CA264_00415 - aspartate kinase, at 90,200 to 91,474
_00415
CA264_00420: CA264_00420 - fructose-bisphosphatase class I, at 91,552 to 92,559
_00420
CA264_00425: CA264_00425 - hypothetical protein, at 92,814 to 93,122
_00425
CA264_00430: CA264_00430 - hypothetical protein, at 93,242 to 93,706
_00430
Position (kb)
91
92
93 Strain fitness (log2 ratio)
-2
-1
0
1 at 91.122 kb on - strand, within CA264_00415 at 91.528 kb on - strand at 91.532 kb on + strand at 91.535 kb on - strand at 91.535 kb on - strand at 91.551 kb on + strand at 91.552 kb on - strand at 91.600 kb on - strand at 91.644 kb on - strand at 91.663 kb on - strand, within CA264_00420 at 91.778 kb on + strand, within CA264_00420 at 91.779 kb on - strand, within CA264_00420 at 91.837 kb on - strand, within CA264_00420 at 91.888 kb on + strand, within CA264_00420 at 91.888 kb on + strand, within CA264_00420 at 92.057 kb on - strand, within CA264_00420 at 92.113 kb on + strand, within CA264_00420 at 92.178 kb on + strand, within CA264_00420 at 92.199 kb on + strand, within CA264_00420 at 92.234 kb on - strand, within CA264_00420 at 92.243 kb on - strand, within CA264_00420 at 92.401 kb on - strand, within CA264_00420 at 92.522 kb on + strand at 92.522 kb on + strand at 92.546 kb on + strand at 92.582 kb on + strand at 92.587 kb on + strand at 92.587 kb on + strand at 92.588 kb on - strand at 92.588 kb on - strand at 92.738 kb on + strand at 92.738 kb on + strand at 92.788 kb on + strand at 93.060 kb on + strand, within CA264_00425 at 93.102 kb on + strand at 93.102 kb on + strand at 93.103 kb on - strand at 93.177 kb on - strand at 93.183 kb on - strand at 93.196 kb on + strand at 93.197 kb on - strand at 93.197 kb on - strand at 93.243 kb on + strand at 93.327 kb on + strand, within CA264_00430 at 93.378 kb on + strand, within CA264_00430 at 93.378 kb on + strand, within CA264_00430 at 93.379 kb on - strand, within CA264_00430 at 93.401 kb on - strand, within CA264_00430 at 93.407 kb on + strand, within CA264_00430 at 93.408 kb on - strand, within CA264_00430 at 93.474 kb on + strand, within CA264_00430 at 93.474 kb on + strand, within CA264_00430 at 93.537 kb on + strand, within CA264_00430 at 93.537 kb on + strand, within CA264_00430 at 93.538 kb on - strand, within CA264_00430 at 93.538 kb on - strand, within CA264_00430
Per-strain Table
Position Strand Gene LocusTag Fraction marine_broth_2216 with Chloride 500 mM remove 91,122 - CA264_00415 0.72 +0.4 91,528 - +0.0 91,532 + -0.0 91,535 - +0.6 91,535 - -0.1 91,551 + -1.1 91,552 - +0.1 91,600 - -2.1 91,644 - -0.7 91,663 - CA264_00420 0.11 +0.1 91,778 + CA264_00420 0.22 -0.7 91,779 - CA264_00420 0.23 -0.7 91,837 - CA264_00420 0.28 +0.9 91,888 + CA264_00420 0.33 -0.1 91,888 + CA264_00420 0.33 +0.9 92,057 - CA264_00420 0.50 +0.9 92,113 + CA264_00420 0.56 +0.9 92,178 + CA264_00420 0.62 -0.7 92,199 + CA264_00420 0.64 -0.7 92,234 - CA264_00420 0.68 +0.9 92,243 - CA264_00420 0.69 -0.7 92,401 - CA264_00420 0.84 -0.1 92,522 + +0.4 92,522 + -0.4 92,546 + -0.7 92,582 + -0.8 92,587 + +1.4 92,587 + -0.5 92,588 - -1.6 92,588 - -0.7 92,738 + -1.1 92,738 + -0.1 92,788 + +0.1 93,060 + CA264_00425 0.80 +0.3 93,102 + -0.0 93,102 + +0.6 93,103 - -0.3 93,177 - -0.7 93,183 - +0.0 93,196 + -0.4 93,197 - +1.3 93,197 - +0.9 93,243 + +0.3 93,327 + CA264_00430 0.18 +0.7 93,378 + CA264_00430 0.29 -1.1 93,378 + CA264_00430 0.29 -0.1 93,379 - CA264_00430 0.29 -0.3 93,401 - CA264_00430 0.34 +0.4 93,407 + CA264_00430 0.35 +0.3 93,408 - CA264_00430 0.36 -0.1 93,474 + CA264_00430 0.50 -0.8 93,474 + CA264_00430 0.50 +0.1 93,537 + CA264_00430 0.63 -0.2 93,537 + CA264_00430 0.63 +0.6 93,538 - CA264_00430 0.64 -0.9 93,538 - CA264_00430 0.64 -0.5
Or see this region's nucleotide sequence