Strain Fitness in Escherichia coli BW25113 around b2821
Experiment: ethyl acetate 5 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | ethyl acetate 5 vol% |
---|---|---|---|---|---|
remove | |||||
2,953,040 | - | recB | b2820 | 0.72 | -1.4 |
2,953,978 | + | +0.4 | |||
2,953,978 | + | -0.2 | |||
2,954,006 | - | -0.4 | |||
2,954,072 | + | -0.5 | |||
2,954,072 | + | +0.3 | |||
2,954,201 | - | -0.3 | |||
2,954,359 | + | ptr | b2821 | 0.12 | +0.2 |
2,954,508 | + | ptr | b2821 | 0.17 | +0.1 |
2,954,516 | + | ptr | b2821 | 0.17 | +1.4 |
2,954,587 | - | ptr | b2821 | 0.20 | +0.1 |
2,954,617 | + | ptr | b2821 | 0.21 | -0.6 |
2,954,617 | + | ptr | b2821 | 0.21 | -0.0 |
2,954,626 | - | ptr | b2821 | 0.21 | +1.0 |
2,954,626 | - | ptr | b2821 | 0.21 | -0.2 |
2,954,713 | - | ptr | b2821 | 0.24 | +0.3 |
2,954,724 | - | ptr | b2821 | 0.24 | +0.1 |
2,954,759 | - | ptr | b2821 | 0.26 | +0.9 |
2,954,759 | - | ptr | b2821 | 0.26 | +1.0 |
2,954,771 | - | ptr | b2821 | 0.26 | -0.6 |
2,954,771 | - | ptr | b2821 | 0.26 | -0.2 |
2,954,777 | - | ptr | b2821 | 0.26 | +0.2 |
2,954,782 | - | ptr | b2821 | 0.26 | -0.2 |
2,954,782 | - | ptr | b2821 | 0.26 | +0.7 |
2,954,857 | + | ptr | b2821 | 0.29 | -0.5 |
2,954,857 | + | ptr | b2821 | 0.29 | +1.0 |
2,954,905 | + | ptr | b2821 | 0.31 | -1.2 |
2,954,905 | + | ptr | b2821 | 0.31 | -0.4 |
2,954,985 | + | ptr | b2821 | 0.33 | +0.1 |
2,954,985 | + | ptr | b2821 | 0.33 | +0.5 |
2,955,059 | + | ptr | b2821 | 0.36 | +0.1 |
2,955,080 | - | ptr | b2821 | 0.37 | +0.2 |
2,955,090 | + | ptr | b2821 | 0.37 | -0.1 |
2,955,232 | - | ptr | b2821 | 0.42 | +0.1 |
2,955,232 | - | ptr | b2821 | 0.42 | -0.3 |
2,955,232 | - | ptr | b2821 | 0.42 | +0.9 |
2,955,265 | - | ptr | b2821 | 0.43 | -0.4 |
2,955,334 | + | ptr | b2821 | 0.46 | -0.8 |
2,955,413 | - | ptr | b2821 | 0.48 | +1.2 |
2,955,413 | - | ptr | b2821 | 0.48 | -0.2 |
2,955,482 | - | ptr | b2821 | 0.51 | +0.6 |
2,955,573 | + | ptr | b2821 | 0.54 | -0.1 |
2,955,733 | + | ptr | b2821 | 0.59 | -0.4 |
2,955,842 | - | ptr | b2821 | 0.63 | +1.2 |
2,955,842 | - | ptr | b2821 | 0.63 | -2.7 |
2,955,842 | - | ptr | b2821 | 0.63 | +0.3 |
2,955,907 | + | ptr | b2821 | 0.65 | -1.2 |
2,955,907 | + | ptr | b2821 | 0.65 | +0.5 |
2,955,912 | + | ptr | b2821 | 0.66 | +0.1 |
2,955,940 | + | ptr | b2821 | 0.67 | +0.3 |
2,956,077 | - | ptr | b2821 | 0.71 | +0.2 |
2,956,077 | - | ptr | b2821 | 0.71 | -0.5 |
2,956,082 | - | ptr | b2821 | 0.71 | -0.4 |
2,956,082 | - | ptr | b2821 | 0.71 | -0.5 |
2,956,353 | - | ptr | b2821 | 0.81 | +0.3 |
2,956,360 | + | ptr | b2821 | 0.81 | +0.8 |
2,956,362 | + | ptr | b2821 | 0.81 | +0.9 |
2,956,370 | - | ptr | b2821 | 0.81 | +0.1 |
2,956,419 | - | ptr | b2821 | 0.83 | -0.2 |
2,956,478 | - | ptr | b2821 | 0.85 | -0.3 |
2,956,478 | - | ptr | b2821 | 0.85 | +0.3 |
2,956,485 | + | ptr | b2821 | 0.85 | +0.4 |
2,956,485 | + | ptr | b2821 | 0.85 | -0.2 |
2,956,598 | - | ptr | b2821 | 0.89 | -1.2 |
2,956,607 | - | ptr | b2821 | 0.90 | +0.6 |
2,956,653 | + | +0.6 | |||
2,956,658 | - | -0.2 | |||
2,956,658 | - | +0.6 | |||
2,956,663 | + | -0.0 | |||
2,956,772 | - | +0.7 | |||
2,956,772 | - | +0.2 | |||
2,956,844 | + | -1.3 | |||
2,956,882 | - | -0.7 | |||
2,957,218 | - | -0.8 | |||
2,957,288 | + | -1.6 | |||
2,957,823 | + | recC | b2822 | 0.22 | -0.6 |
Or see this region's nucleotide sequence